(5 nodes) Ku70/Ku80 beta-barrel domain network (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0C319_PARTE	Ku domain-containing protein. (739 aa)
	A0BLP5_PARTE	Ku domain-containing protein. (737 aa)
	ku70-2	Ku70-like protein. (603 aa)
	A0C6A0_PARTE	Ku domain-containing protein. (738 aa)
	ku70-1	Ku70-like protein. (602 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BLP5_PARTE	A0C319_PARTE	A0BLP5	A0C319	Ku domain-containing protein.	Ku domain-containing protein.	0.901
A0BLP5_PARTE	A0C6A0_PARTE	A0BLP5	A0C6A0	Ku domain-containing protein.	Ku domain-containing protein.	0.901
A0BLP5_PARTE	ku70-1	A0BLP5	Q4LBE9	Ku domain-containing protein.	Ku70-like protein.	0.996
A0BLP5_PARTE	ku70-2	A0BLP5	Q4LBE8	Ku domain-containing protein.	Ku70-like protein.	0.996
A0C319_PARTE	A0BLP5_PARTE	A0C319	A0BLP5	Ku domain-containing protein.	Ku domain-containing protein.	0.901
A0C319_PARTE	A0C6A0_PARTE	A0C319	A0C6A0	Ku domain-containing protein.	Ku domain-containing protein.	0.900
A0C319_PARTE	ku70-1	A0C319	Q4LBE9	Ku domain-containing protein.	Ku70-like protein.	0.996
A0C319_PARTE	ku70-2	A0C319	Q4LBE8	Ku domain-containing protein.	Ku70-like protein.	0.996
A0C6A0_PARTE	A0BLP5_PARTE	A0C6A0	A0BLP5	Ku domain-containing protein.	Ku domain-containing protein.	0.901
A0C6A0_PARTE	A0C319_PARTE	A0C6A0	A0C319	Ku domain-containing protein.	Ku domain-containing protein.	0.900
A0C6A0_PARTE	ku70-1	A0C6A0	Q4LBE9	Ku domain-containing protein.	Ku70-like protein.	0.996
A0C6A0_PARTE	ku70-2	A0C6A0	Q4LBE8	Ku domain-containing protein.	Ku70-like protein.	0.996
ku70-1	A0BLP5_PARTE	Q4LBE9	A0BLP5	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-1	A0C319_PARTE	Q4LBE9	A0C319	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-1	A0C6A0_PARTE	Q4LBE9	A0C6A0	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-1	ku70-2	Q4LBE9	Q4LBE8	Ku70-like protein.	Ku70-like protein.	0.900
ku70-2	A0BLP5_PARTE	Q4LBE8	A0BLP5	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-2	A0C319_PARTE	Q4LBE8	A0C319	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-2	A0C6A0_PARTE	Q4LBE8	A0C6A0	Ku70-like protein.	Ku domain-containing protein.	0.996
ku70-2	ku70-1	Q4LBE8	Q4LBE9	Ku70-like protein.	Ku70-like protein.	0.900