(6 nodes) GINS, helical bundle-like domain superfamily network (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0CMA2_PARTE	Uncharacterized protein. (235 aa)
	A0D3B1_PARTE	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (201 aa)
	A0E614_PARTE	Uncharacterized protein. (189 aa)
	A0CXB0_PARTE	Sld5 domain-containing protein. (182 aa)
	A0CZ06_PARTE	Sld5 domain-containing protein. (182 aa)
	A0BZZ9_PARTE	Sld5 domain-containing protein. (196 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BZZ9_PARTE	A0CMA2_PARTE	A0BZZ9	A0CMA2	Sld5 domain-containing protein.	Uncharacterized protein.	0.540
A0BZZ9_PARTE	A0CXB0_PARTE	A0BZZ9	A0CXB0	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.999
A0BZZ9_PARTE	A0CZ06_PARTE	A0BZZ9	A0CZ06	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.999
A0BZZ9_PARTE	A0D3B1_PARTE	A0BZZ9	A0D3B1	Sld5 domain-containing protein.	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.	0.540
A0BZZ9_PARTE	A0E614_PARTE	A0BZZ9	A0E614	Sld5 domain-containing protein.	Uncharacterized protein.	0.999
A0CMA2_PARTE	A0BZZ9_PARTE	A0CMA2	A0BZZ9	Uncharacterized protein.	Sld5 domain-containing protein.	0.540
A0CMA2_PARTE	A0CXB0_PARTE	A0CMA2	A0CXB0	Uncharacterized protein.	Sld5 domain-containing protein.	0.540
A0CMA2_PARTE	A0CZ06_PARTE	A0CMA2	A0CZ06	Uncharacterized protein.	Sld5 domain-containing protein.	0.540
A0CMA2_PARTE	A0D3B1_PARTE	A0CMA2	A0D3B1	Uncharacterized protein.	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.	0.540
A0CMA2_PARTE	A0E614_PARTE	A0CMA2	A0E614	Uncharacterized protein.	Uncharacterized protein.	0.540
A0CXB0_PARTE	A0BZZ9_PARTE	A0CXB0	A0BZZ9	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.999
A0CXB0_PARTE	A0CMA2_PARTE	A0CXB0	A0CMA2	Sld5 domain-containing protein.	Uncharacterized protein.	0.540
A0CXB0_PARTE	A0CZ06_PARTE	A0CXB0	A0CZ06	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.543
A0CXB0_PARTE	A0D3B1_PARTE	A0CXB0	A0D3B1	Sld5 domain-containing protein.	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.	0.540
A0CXB0_PARTE	A0E614_PARTE	A0CXB0	A0E614	Sld5 domain-containing protein.	Uncharacterized protein.	0.999
A0CZ06_PARTE	A0BZZ9_PARTE	A0CZ06	A0BZZ9	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.999
A0CZ06_PARTE	A0CMA2_PARTE	A0CZ06	A0CMA2	Sld5 domain-containing protein.	Uncharacterized protein.	0.540
A0CZ06_PARTE	A0CXB0_PARTE	A0CZ06	A0CXB0	Sld5 domain-containing protein.	Sld5 domain-containing protein.	0.543
A0CZ06_PARTE	A0D3B1_PARTE	A0CZ06	A0D3B1	Sld5 domain-containing protein.	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.	0.540
A0CZ06_PARTE	A0E614_PARTE	A0CZ06	A0E614	Sld5 domain-containing protein.	Uncharacterized protein.	0.999