(9 nodes) Ubiquitin-protein ligase E3A/B/C-like network (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0CKD6_PARTE	Uncharacterized protein. (939 aa)
	A0CNH3_PARTE	Uncharacterized protein. (931 aa)
	A0BND4_PARTE	HECT domain-containing protein. (978 aa)
	PTMB.105	Ubiquitin protein ligase, putative. (908 aa)
	A0EFC1_PARTE	Uncharacterized protein. (969 aa)
	A0E5N5_PARTE	HECT domain-containing protein. (903 aa)
	A0E4G5_PARTE	Uncharacterized protein. (958 aa)
	A0DZN4_PARTE	HECT domain-containing protein. (966 aa)
	A0DLU6_PARTE	HECT domain-containing protein. (4284 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BND4_PARTE	A0E4G5_PARTE	A0BND4	A0E4G5	HECT domain-containing protein.	Uncharacterized protein.	0.901
A0BND4_PARTE	A0EFC1_PARTE	A0BND4	A0EFC1	HECT domain-containing protein.	Uncharacterized protein.	0.900
A0CNH3_PARTE	A0E5N5_PARTE	A0CNH3	A0E5N5	Uncharacterized protein.	HECT domain-containing protein.	0.902
A0E4G5_PARTE	A0BND4_PARTE	A0E4G5	A0BND4	Uncharacterized protein.	HECT domain-containing protein.	0.901
A0E4G5_PARTE	A0EFC1_PARTE	A0E4G5	A0EFC1	Uncharacterized protein.	Uncharacterized protein.	0.901
A0E5N5_PARTE	A0CNH3_PARTE	A0E5N5	A0CNH3	HECT domain-containing protein.	Uncharacterized protein.	0.902
A0EFC1_PARTE	A0BND4_PARTE	A0EFC1	A0BND4	Uncharacterized protein.	HECT domain-containing protein.	0.900
A0EFC1_PARTE	A0E4G5_PARTE	A0EFC1	A0E4G5	Uncharacterized protein.	Uncharacterized protein.	0.901