STRINGSTRING
A0CDW8_PARTE A0CDW8_PARTE PTMB.314c PTMB.314c ngp_A80 ngp_A80 A0EHL2_PARTE A0EHL2_PARTE A0EER5_PARTE A0EER5_PARTE A0EE91_PARTE A0EE91_PARTE A0ECG9_PARTE A0ECG9_PARTE EIF6-3 EIF6-3 A0E5T7_PARTE A0E5T7_PARTE A0E352_PARTE A0E352_PARTE A0E170_PARTE A0E170_PARTE A0DKQ7_PARTE A0DKQ7_PARTE A0DEJ7_PARTE A0DEJ7_PARTE A0DC20_PARTE A0DC20_PARTE A0D4H0_PARTE A0D4H0_PARTE A0D1P2_PARTE A0D1P2_PARTE A0D0B8_PARTE A0D0B8_PARTE A0CNN4_PARTE A0CNN4_PARTE A0CL25_PARTE A0CL25_PARTE A0CKJ4_PARTE A0CKJ4_PARTE A0C7R2_PARTE A0C7R2_PARTE A0C6M2_PARTE A0C6M2_PARTE A0C2X4_PARTE A0C2X4_PARTE EIF6-2 EIF6-2 EIF6 EIF6 A0BP73_PARTE A0BP73_PARTE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0CDW8_PARTEUncharacterized protein. (202 aa)
PTMB.314cH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (195 aa)
ngp_A80Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (648 aa)
A0EHL2_PARTEProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (761 aa)
A0EER5_PARTEPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (902 aa)
A0EE91_PARTEPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (954 aa)
A0ECG9_PARTEH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (344 aa)
EIF6-3Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
A0E5T7_PARTEH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (202 aa)
A0E352_PARTEKRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (348 aa)
A0E170_PARTERibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (656 aa)
A0DKQ7_PARTERibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (656 aa)
A0DEJ7_PARTEPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)
A0DC20_PARTERibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (220 aa)
A0D4H0_PARTENucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (629 aa)
A0D1P2_PARTEPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)
A0D0B8_PARTERibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (220 aa)
A0CNN4_PARTEProbable ribosome biogenesis protein GSPATT00008843001; Probable pre-rRNA processing protein involved in ribosome biogenesis. (255 aa)
A0CL25_PARTE60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (183 aa)
A0CKJ4_PARTEProbable ribosome biogenesis protein GSPATT00001025001; Probable pre-rRNA processing protein involved in ribosome biogenesis. (256 aa)
A0C7R2_PARTE60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (183 aa)
A0C6M2_PARTEWD_REPEATS_REGION domain-containing protein. (380 aa)
A0C2X4_PARTEWD_REPEATS_REGION domain-containing protein. (380 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (240 aa)
A0BP73_PARTEProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (766 aa)
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.