39 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BNB9_PARTE	Dna2 domain-containing protein. (896 aa)
	A0BC65_PARTE	Rep_fac-A_C domain-containing protein. (635 aa)
	A0BFQ2_PARTE	AAA domain-containing protein. (351 aa)
	A0BKF0_PARTE	Uncharacterized protein. (456 aa)
	A0BMP6_PARTE	DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (568 aa)
	A0BN24_PARTE	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	A0BP76_PARTE	Replication factor C subunit 1. (807 aa)
	A0BPL7_PARTE	Replication factor C subunit 1. (929 aa)
	A0BZZ9_PARTE	Sld5 domain-containing protein. (196 aa)
	A0C2B5_PARTE	Uncharacterized protein. (493 aa)
	A0C4N1_PARTE	DNA_pol_E_B domain-containing protein. (481 aa)
	A0C9Y4_PARTE	Rep_fac-A_C domain-containing protein. (555 aa)
	A0CAF3_PARTE	AAA domain-containing protein. (340 aa)
	A0CIK7_PARTE	AAA domain-containing protein. (356 aa)
	A0CPS3_PARTE	Replication factor C subunit 1. (933 aa)
	A0CSY4_PARTE	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (243 aa)
	A0CXB0_PARTE	Sld5 domain-containing protein. (182 aa)
	A0CXL6_PARTE	Uncharacterized protein. (633 aa)
	FEN1-1	Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
	FEN1-2	Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
	A0CYG6_PARTE	DNA polymerase. (980 aa)
	A0CYN4_PARTE	Uncharacterized protein. (632 aa)
	A0CZ06_PARTE	Sld5 domain-containing protein. (182 aa)
	A0D7P3_PARTE	DNA polymerase. (1344 aa)
	A0DPB1_PARTE	Uncharacterized protein. (341 aa)
	A0DPB2_PARTE	Uncharacterized protein. (725 aa)
	A0DXQ3_PARTE	Uncharacterized protein. (459 aa)
	A0E2K0_PARTE	Uncharacterized protein. (462 aa)
	A0E614_PARTE	Uncharacterized protein. (189 aa)
	A0E7B8_PARTE	Uncharacterized protein. (730 aa)
	A0E9J9_PARTE	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	A0EA99_PARTE	DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (680 aa)
	A0EAG1_PARTE	Uncharacterized protein. (148 aa)
	A0EDI0_PARTE	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	A0EFE2_PARTE	Dna2 domain-containing protein. (859 aa)
	A0EG74_PARTE	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (410 aa)
	A0EG83_PARTE	AAA domain-containing protein. (384 aa)
	A0EGE2_PARTE	DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (564 aa)
	A0EHK8_PARTE	Replication factor C subunit 1. (972 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BC65_PARTE	A0BFQ2_PARTE	A0BC65	A0BFQ2	Rep_fac-A_C domain-containing protein.	AAA domain-containing protein.	0.890
A0BC65_PARTE	A0BKF0_PARTE	A0BC65	A0BKF0	Rep_fac-A_C domain-containing protein.	Uncharacterized protein.	0.683
A0BC65_PARTE	A0BMP6_PARTE	A0BC65	A0BMP6	Rep_fac-A_C domain-containing protein.	DNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family.	0.758
A0BC65_PARTE	A0BN24_PARTE	A0BC65	A0BN24	Rep_fac-A_C domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.900
A0BC65_PARTE	A0BNB9_PARTE	A0BC65	A0BNB9	Rep_fac-A_C domain-containing protein.	Dna2 domain-containing protein.	0.971
A0BC65_PARTE	A0BP76_PARTE	A0BC65	A0BP76	Rep_fac-A_C domain-containing protein.	Replication factor C subunit 1.	0.851
A0BC65_PARTE	A0BPL7_PARTE	A0BC65	A0BPL7	Rep_fac-A_C domain-containing protein.	Replication factor C subunit 1.	0.851
A0BC65_PARTE	A0C2B5_PARTE	A0BC65	A0C2B5	Rep_fac-A_C domain-containing protein.	Uncharacterized protein.	0.866
A0BC65_PARTE	A0C4N1_PARTE	A0BC65	A0C4N1	Rep_fac-A_C domain-containing protein.	DNA_pol_E_B domain-containing protein.	0.768
A0BC65_PARTE	A0CAF3_PARTE	A0BC65	A0CAF3	Rep_fac-A_C domain-containing protein.	AAA domain-containing protein.	0.859
A0BC65_PARTE	A0CIK7_PARTE	A0BC65	A0CIK7	Rep_fac-A_C domain-containing protein.	AAA domain-containing protein.	0.867
A0BC65_PARTE	A0CPS3_PARTE	A0BC65	A0CPS3	Rep_fac-A_C domain-containing protein.	Replication factor C subunit 1.	0.851
A0BC65_PARTE	A0CSY4_PARTE	A0BC65	A0CSY4	Rep_fac-A_C domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.900
A0BC65_PARTE	A0CXB0_PARTE	A0BC65	A0CXB0	Rep_fac-A_C domain-containing protein.	Sld5 domain-containing protein.	0.484
A0BC65_PARTE	A0CYG6_PARTE	A0BC65	A0CYG6	Rep_fac-A_C domain-containing protein.	DNA polymerase.	0.856
A0BC65_PARTE	A0CZ06_PARTE	A0BC65	A0CZ06	Rep_fac-A_C domain-containing protein.	Sld5 domain-containing protein.	0.484
A0BC65_PARTE	A0D7P3_PARTE	A0BC65	A0D7P3	Rep_fac-A_C domain-containing protein.	DNA polymerase.	0.888
A0BC65_PARTE	A0DPB1_PARTE	A0BC65	A0DPB1	Rep_fac-A_C domain-containing protein.	Uncharacterized protein.	0.856
A0BC65_PARTE	A0DPB2_PARTE	A0BC65	A0DPB2	Rep_fac-A_C domain-containing protein.	Uncharacterized protein.	0.856
A0BC65_PARTE	A0DXQ3_PARTE	A0BC65	A0DXQ3	Rep_fac-A_C domain-containing protein.	Uncharacterized protein.	0.683