18 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0DIT6_PARTE	Uncharacterized protein. (311 aa)
	A0DK55_PARTE	DNA ligase. (944 aa)
	A0BKS9_PARTE	Uncharacterized protein. (563 aa)
	A0BMX2_PARTE	BRCT domain-containing protein. (680 aa)
	A0BP76_PARTE	Replication factor C subunit 1. (807 aa)
	A0BPL7_PARTE	Replication factor C subunit 1. (929 aa)
	A0CKE3_PARTE	Uncharacterized protein. (461 aa)
	A0CNI2_PARTE	Uncharacterized protein. (457 aa)
	A0DRL5_PARTE	Uncharacterized protein. (311 aa)
	A0DU73_PARTE	Uncharacterized protein. (659 aa)
	A0DXL3_PARTE	BRCT domain-containing protein. (466 aa)
	A0E4V6_PARTE	Uncharacterized protein. (659 aa)
	A0E7E3_PARTE	BRCT domain-containing protein. (316 aa)
	A0EDB7_PARTE	BRCT domain-containing protein. (665 aa)
	A0EHK8_PARTE	Replication factor C subunit 1. (972 aa)
	A0CST2_PARTE	BRCT domain-containing protein. (658 aa)
	A0D1P2_PARTE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)
	A0DEJ7_PARTE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BKS9_PARTE	A0BMX2_PARTE	A0BKS9	A0BMX2	Uncharacterized protein.	BRCT domain-containing protein.	0.942
A0BKS9_PARTE	A0BP76_PARTE	A0BKS9	A0BP76	Uncharacterized protein.	Replication factor C subunit 1.	0.610
A0BKS9_PARTE	A0BPL7_PARTE	A0BKS9	A0BPL7	Uncharacterized protein.	Replication factor C subunit 1.	0.610
A0BKS9_PARTE	A0CKE3_PARTE	A0BKS9	A0CKE3	Uncharacterized protein.	Uncharacterized protein.	0.943
A0BKS9_PARTE	A0CNI2_PARTE	A0BKS9	A0CNI2	Uncharacterized protein.	Uncharacterized protein.	0.943
A0BKS9_PARTE	A0CST2_PARTE	A0BKS9	A0CST2	Uncharacterized protein.	BRCT domain-containing protein.	0.942
A0BKS9_PARTE	A0DIT6_PARTE	A0BKS9	A0DIT6	Uncharacterized protein.	Uncharacterized protein.	0.943
A0BKS9_PARTE	A0DRL5_PARTE	A0BKS9	A0DRL5	Uncharacterized protein.	Uncharacterized protein.	0.943
A0BKS9_PARTE	A0EDB7_PARTE	A0BKS9	A0EDB7	Uncharacterized protein.	BRCT domain-containing protein.	0.942
A0BKS9_PARTE	A0EHK8_PARTE	A0BKS9	A0EHK8	Uncharacterized protein.	Replication factor C subunit 1.	0.610
A0BMX2_PARTE	A0BKS9_PARTE	A0BMX2	A0BKS9	BRCT domain-containing protein.	Uncharacterized protein.	0.942
A0BMX2_PARTE	A0CKE3_PARTE	A0BMX2	A0CKE3	BRCT domain-containing protein.	Uncharacterized protein.	0.704
A0BMX2_PARTE	A0CNI2_PARTE	A0BMX2	A0CNI2	BRCT domain-containing protein.	Uncharacterized protein.	0.704
A0BMX2_PARTE	A0DIT6_PARTE	A0BMX2	A0DIT6	BRCT domain-containing protein.	Uncharacterized protein.	0.704
A0BMX2_PARTE	A0DRL5_PARTE	A0BMX2	A0DRL5	BRCT domain-containing protein.	Uncharacterized protein.	0.704
A0BP76_PARTE	A0BKS9_PARTE	A0BP76	A0BKS9	Replication factor C subunit 1.	Uncharacterized protein.	0.610
A0BP76_PARTE	A0BPL7_PARTE	A0BP76	A0BPL7	Replication factor C subunit 1.	Replication factor C subunit 1.	0.442
A0BP76_PARTE	A0CKE3_PARTE	A0BP76	A0CKE3	Replication factor C subunit 1.	Uncharacterized protein.	0.629
A0BP76_PARTE	A0CNI2_PARTE	A0BP76	A0CNI2	Replication factor C subunit 1.	Uncharacterized protein.	0.629
A0BP76_PARTE	A0DIT6_PARTE	A0BP76	A0DIT6	Replication factor C subunit 1.	Uncharacterized protein.	0.629