(21 nodes) Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and ABC transporter, BtuC-like network (Brevundimonas naejangsanensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DA69_02400	DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	entE	Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
	ANF55821.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	ANF53708.1	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
	ANF53709.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1296 aa)
	ANF53710.1	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	ANF55876.1	RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (270 aa)
	ANF54156.1	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. (298 aa)
	ANF54157.1	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	ANF54158.1	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	ANF54159.1	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	ANF54160.1	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (329 aa)
	ANF55877.1	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	ANF54703.1	ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	ANF55931.1	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
	ANF55162.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	ANF55163.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	ANF55164.1	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	ANF55972.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (364 aa)
	ANF55165.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	ANF55395.1	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)

Your Current Organism:

Brevundimonas naejangsanensis

NCBI taxonomy Id: 588932
Other names: B. naejangsanensis, Brevundimonas naejangsanensis Kang et al. 2009, CCUG 57609, DSM 23858, KCTC 22631, strain BIO-TAS2-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANF53708.1	ANF53709.1	DA69_02415	DA69_02420	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53708.1	ANF53710.1	DA69_02415	DA69_02425	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ANF53708.1	ANF55162.1	DA69_02415	DA69_10620	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
ANF53708.1	ANF55163.1	DA69_02415	DA69_10625	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
ANF53708.1	ANF55164.1	DA69_02415	DA69_10630	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
ANF53708.1	ANF55165.1	DA69_02415	DA69_10640	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
ANF53708.1	ANF55821.1	DA69_02415	DA69_02410	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
ANF53708.1	DA69_02400	DA69_02415	DA69_02400	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ANF53708.1	entE	DA69_02415	DA69_02405	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53709.1	ANF53708.1	DA69_02420	DA69_02415	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53709.1	ANF53710.1	DA69_02420	DA69_02425	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ANF53709.1	ANF54159.1	DA69_02420	DA69_05030	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
ANF53709.1	ANF54160.1	DA69_02420	DA69_05035	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.576
ANF53709.1	ANF55162.1	DA69_02420	DA69_10620	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
ANF53709.1	ANF55163.1	DA69_02420	DA69_10625	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
ANF53709.1	ANF55164.1	DA69_02420	DA69_10630	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
ANF53709.1	ANF55165.1	DA69_02420	DA69_10640	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
ANF53709.1	ANF55821.1	DA69_02420	DA69_02410	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53709.1	ANF55877.1	DA69_02420	DA69_05040	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582
ANF53709.1	ANF55931.1	DA69_02420	DA69_08105	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427