(6 nodes) Nickel cation transmembrane transporter activity, and Amide transport network (Brevundimonas naejangsanensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANF53806.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (513 aa)
	ANF53807.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (297 aa)
	ANF53808.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	ANF53809.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (268 aa)
	ANF53810.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	ANF54697.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)

Your Current Organism:

Brevundimonas naejangsanensis

NCBI taxonomy Id: 588932
Other names: B. naejangsanensis, Brevundimonas naejangsanensis Kang et al. 2009, CCUG 57609, DSM 23858, KCTC 22631, strain BIO-TAS2-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANF53806.1	ANF53807.1	DA69_02985	DA69_02990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.995
ANF53806.1	ANF53808.1	DA69_02985	DA69_02995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
ANF53806.1	ANF53809.1	DA69_02985	DA69_03000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
ANF53806.1	ANF53810.1	DA69_02985	DA69_03005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANF53806.1	ANF54697.1	DA69_02985	DA69_08065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
ANF53807.1	ANF53806.1	DA69_02990	DA69_02985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.995
ANF53807.1	ANF53808.1	DA69_02990	DA69_02995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANF53807.1	ANF53809.1	DA69_02990	DA69_03000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
ANF53807.1	ANF53810.1	DA69_02990	DA69_03005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANF53807.1	ANF54697.1	DA69_02990	DA69_08065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANF53808.1	ANF53806.1	DA69_02995	DA69_02985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.996
ANF53808.1	ANF53807.1	DA69_02995	DA69_02990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
ANF53808.1	ANF53809.1	DA69_02995	DA69_03000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ANF53808.1	ANF53810.1	DA69_02995	DA69_03005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53808.1	ANF54697.1	DA69_02995	DA69_08065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53809.1	ANF53806.1	DA69_03000	DA69_02985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
ANF53809.1	ANF53807.1	DA69_03000	DA69_02990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
ANF53809.1	ANF53808.1	DA69_03000	DA69_02995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53809.1	ANF53810.1	DA69_03000	DA69_03005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANF53809.1	ANF54697.1	DA69_03000	DA69_08065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917