(18 nodes) Type II protein secretion system complex network (Brevundimonas naejangsanensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANF55770.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	ANF53303.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (402 aa)
	ANF55771.1	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
	ANF53310.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (332 aa)
	ANF54571.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (134 aa)
	ANF54573.1	General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	ANF54574.1	Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	ANF55921.1	Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
	ANF54575.1	Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	gspG	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	gspF	Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	gspE	Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (497 aa)
	ANF54580.1	General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	ANF55645.1	Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (522 aa)
	ANF56049.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	ANF55757.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (402 aa)
	ANF56050.1	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
	ANF55764.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (207 aa)

Your Current Organism:

Brevundimonas naejangsanensis

NCBI taxonomy Id: 588932
Other names: B. naejangsanensis, Brevundimonas naejangsanensis Kang et al. 2009, CCUG 57609, DSM 23858, KCTC 22631, strain BIO-TAS2-2

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANF53303.1	ANF55770.1	DA69_00050	DA69_00035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
ANF53303.1	ANF55771.1	DA69_00050	DA69_00075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
ANF53303.1	ANF55921.1	DA69_00050	DA69_07370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
ANF53303.1	ANF56049.1	DA69_00050	DA69_14055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANF53303.1	ANF56050.1	DA69_00050	DA69_14095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
ANF53303.1	gspE	DA69_00050	DA69_07390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.925
ANF53303.1	gspF	DA69_00050	DA69_07385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
ANF53303.1	gspG	DA69_00050	DA69_07380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
ANF53310.1	ANF54574.1	DA69_00090	DA69_07365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
ANF54571.1	ANF54573.1	DA69_07350	DA69_07360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ANF54571.1	ANF54574.1	DA69_07350	DA69_07365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ANF54571.1	ANF54575.1	DA69_07350	DA69_07375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
ANF54571.1	ANF54580.1	DA69_07350	DA69_07400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
ANF54571.1	ANF55921.1	DA69_07350	DA69_07370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
ANF54571.1	gspE	DA69_07350	DA69_07390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.411
ANF54571.1	gspF	DA69_07350	DA69_07385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
ANF54571.1	gspG	DA69_07350	DA69_07380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
ANF54573.1	ANF54571.1	DA69_07360	DA69_07350	General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.695
ANF54573.1	ANF54574.1	DA69_07360	DA69_07365	General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ANF54573.1	ANF54575.1	DA69_07360	DA69_07375	General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819