13 items (Tilletiopsis washingtonensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316Z141	Uncharacterized protein. (975 aa)
	A0A316Z353	NTF2-like protein. (682 aa)
	A0A316Z485	GN3L_Grn1 domain-containing protein. (696 aa)
	A0A316Z5C9	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (743 aa)
	A0A316Z7D3	CP-type G domain-containing protein. (766 aa)
	A0A316Z7Q4	AAA-domain-containing protein. (506 aa)
	A0A316ZAY7	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (462 aa)
	A0A316ZBE5	C2H2-type domain-containing protein. (115 aa)
	A0A316ZBY8	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (864 aa)
	A0A316ZE46	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (563 aa)
	A0A316ZEX6	Putative CRM1-nuclear export factor, exportin. (1072 aa)
	A0A316ZGV1	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (347 aa)
	A0A316ZKW1	DnaJ-domain-containing protein. (625 aa)

Your Current Organism:

Tilletiopsis washingtonensis

NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316Z353	A0A316Z485	NTF2-like protein.	GN3L_Grn1 domain-containing protein.	0.442
A0A316Z353	A0A316Z5C9	NTF2-like protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.419
A0A316Z353	A0A316Z7D3	NTF2-like protein.	CP-type G domain-containing protein.	0.442
A0A316Z353	A0A316ZBE5	NTF2-like protein.	C2H2-type domain-containing protein.	0.476
A0A316Z353	A0A316ZE46	NTF2-like protein.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.791
A0A316Z353	A0A316ZEX6	NTF2-like protein.	Putative CRM1-nuclear export factor, exportin.	0.786
A0A316Z485	A0A316Z353	GN3L_Grn1 domain-containing protein.	NTF2-like protein.	0.442
A0A316Z485	A0A316Z5C9	GN3L_Grn1 domain-containing protein.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.997
A0A316Z485	A0A316Z7Q4	GN3L_Grn1 domain-containing protein.	AAA-domain-containing protein.	0.710
A0A316Z485	A0A316ZAY7	GN3L_Grn1 domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.874
A0A316Z485	A0A316ZBE5	GN3L_Grn1 domain-containing protein.	C2H2-type domain-containing protein.	0.914
A0A316Z485	A0A316ZBY8	GN3L_Grn1 domain-containing protein.	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.	0.975
A0A316Z485	A0A316ZE46	GN3L_Grn1 domain-containing protein.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.924
A0A316Z485	A0A316ZGV1	GN3L_Grn1 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.915
A0A316Z5C9	A0A316Z353	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	NTF2-like protein.	0.419
A0A316Z5C9	A0A316Z485	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	GN3L_Grn1 domain-containing protein.	0.997
A0A316Z5C9	A0A316Z7D3	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	CP-type G domain-containing protein.	0.997
A0A316Z5C9	A0A316Z7Q4	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	AAA-domain-containing protein.	0.808
A0A316Z5C9	A0A316ZAY7	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.993
A0A316Z5C9	A0A316ZBE5	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	C2H2-type domain-containing protein.	0.984