STRINGSTRING
Ferp_1089 Ferp_1089 Ferp_1121 Ferp_1121 Ferp_1901 Ferp_1901 Ferp_2210 Ferp_2210 Ferp_2215 Ferp_2215
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_1089PFAM: SirA family protein; KEGG: bca:BCE_0868 hypothetical protein. (68 aa)
Ferp_1121PFAM: SirA family protein; KEGG: afu:AF0188 hypothetical protein. (72 aa)
Ferp_1901PFAM: DsrE family protein; KEGG: mma:MM_3292 hypothetical protein. (104 aa)
Ferp_2210PFAM: SirA family protein; KEGG: afu:AF0554 hypothetical protein. (73 aa)
Ferp_2215PFAM: SirA family protein; KEGG: mvu:Metvu_0623 SirA family protein. (71 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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