STRINGSTRING
Ferp_0613 Ferp_0613 Ferp_1298 Ferp_1298 Ferp_1366 Ferp_1366 Ferp_1429 Ferp_1429 Ferp_2472 Ferp_2472
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0613PFAM: protein of unknown function DUF125 transmembrane; KEGG: afu:AF0630 hypothetical protein. (193 aa)
Ferp_1298PFAM: protein of unknown function DUF211; KEGG: afu:AF1549 hypothetical protein. (96 aa)
Ferp_1366PFAM: Bacterio-opsin activator HTH domain protein; KEGG: afu:AF1429 hypothetical protein. (208 aa)
Ferp_1429PFAM: Sjogrens syndrome scleroderma autoantigen 1; KEGG: afu:AF2370 hypothetical protein. (135 aa)
Ferp_2472PFAM: Bacterio-opsin activator HTH domain protein; KEGG: nph:NP6030A DNA binding protein. (232 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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