STRINGSTRING
Ferp_0282 Ferp_0282 Ferp_0283 Ferp_0283 Ferp_0285 Ferp_0285 Ferp_0286 Ferp_0286 Ferp_0354 Ferp_0354 Ferp_0355 Ferp_0355 Ferp_0357 Ferp_0357
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0282PFAM: Protein of unknown function DUF1119; SMART: Peptidase A22, presenilin signal peptide; KEGG: afu:AF1952 hypothetical protein. (252 aa)
Ferp_0283PFAM: PilT protein domain protein; K Homology, type 1, subgroup; SMART: Nucleotide binding protein PINc; AAA ATPase; KH domain protein; KEGG: afu:AF1951 ATPase. (593 aa)
Ferp_0285KEGG: afu:AF0518 hypothetical protein. (231 aa)
Ferp_0286PFAM: Protein of unknown function DUF509; KEGG: afu:AF0519 hypothetical protein. (155 aa)
Ferp_0354PFAM: Like-Sm ribonucleoprotein core; SMART: Sm-family ribonucleoprotein; KEGG: afu:AF0362 snRNP, putative. (74 aa)
Ferp_0355Putative transcriptional regulator, AsnC family; PFAM: regulatory protein MarR; KEGG: afu:AF0363 transcriptional repressor (CinR). (120 aa)
Ferp_0357PFAM: protein of unknown function DUF95 transmembrane; KEGG: mvu:Metvu_0323 protein of unknown function DUF95 transmembrane. (172 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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