STRINGSTRING
Ferp_0970 Ferp_0970 Ferp_1643 Ferp_1643 Ferp_2346 Ferp_2346 Ferp_2503 Ferp_2503 Ferp_2506 Ferp_2506 Ferp_2507 Ferp_2507 Ferp_2508 Ferp_2508 Ferp_2509 Ferp_2509
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0970KEGG: mma:MM_0832 hypothetical protein. (449 aa)
Ferp_1643PFAM: YYY membrane protein; KEGG: mma:MM_0839 hypothetical protein. (697 aa)
Ferp_2346PFAM: amine oxidase; KEGG: afu:AF1738 hypothetical protein. (401 aa)
Ferp_2503PFAM: protein of unknown function DUF6 transmembrane; KEGG: afu:AF0510 hypothetical protein. (273 aa)
Ferp_2506KEGG: saf:SULAZ_1671 hypothetical protein. (152 aa)
Ferp_2507PFAM: conserved hypothetical protein; KEGG: afu:AF1126 P450 cytochrome, putative. (149 aa)
Ferp_2508PFAM: protein of unknown function UPF0047; KEGG: afu:AF0741 hypothetical protein. (136 aa)
Ferp_2509PFAM: YYY membrane protein; KEGG: mba:Mbar_A0504 hypothetical protein. (616 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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