STRINGSTRING
Ferp_1405 Ferp_1405 Ferp_1406 Ferp_1406 Ferp_1407 Ferp_1407 Ferp_1408 Ferp_1408 Ferp_1409 Ferp_1409
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_1405PFAM: NUDIX hydrolase; KEGG: afu:AF1234 mutator protein MutT (MutT). (137 aa)
Ferp_1406PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: afu:AF1233 hypothetical protein. (212 aa)
Ferp_1407PFAM: Exosortase EpsH-related; KEGG: afu:AF2046 cytochrome oxidase, subunit I, putative. (248 aa)
Ferp_1408KEGG: afu:AF2045 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related. (190 aa)
Ferp_1409TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: afu:AF2044 CDP-diacylglycerol--serine O-phosphatidyltransferase (PssA); Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (184 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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