STRINGSTRING
mfnB mfnB Ferp_0374 Ferp_0374 mch mch Ferp_0818 Ferp_0818 Ferp_0819 Ferp_0819 ftr ftr Ferp_1934 Ferp_1934 Ferp_1935 Ferp_1935 Ferp_1936 Ferp_1936 Ferp_2242 Ferp_2242 Ferp_2285 Ferp_2285
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mfnBProtein of unknown function DUF556; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). (234 aa)
Ferp_0374TIGRFAM: hisA/hisF family protein; PFAM: histidine biosynthesis protein; KEGG: afu:AF0713 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA-1); Belongs to the HisA/HisF family. (223 aa)
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family. (315 aa)
Ferp_0818PFAM: aspartate/glutamate/uridylate kinase; KEGG: afu:AF0572 hypothetical protein. (196 aa)
Ferp_0819TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: afu:AF0479 hypothetical protein. (310 aa)
ftrFormylmethanofuran/tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family. (297 aa)
Ferp_1934PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: afu:AF1835 hypothetical protein. (280 aa)
Ferp_1935PFAM: protein of unknown function DUF447; KEGG: afu:AF1834 hypothetical protein. (178 aa)
Ferp_1936PFAM: ATP-NAD/AcoX kinase; KEGG: afu:AF0748 hypothetical protein. (298 aa)
Ferp_2242TIGRFAM: dihydropteroate synthase-related protein; PFAM: dihydropteroate synthase DHPS; KEGG: afu:AF1414 dihydropteroate synthase. (480 aa)
Ferp_2285PFAM: protein of unknown function DUF201; KEGG: afu:AF1061 hypothetical protein. (305 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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