STRINGSTRING
Ferp_0083 Ferp_0083 Ferp_0178 Ferp_0178 Ferp_0397 Ferp_0397 Ferp_1002 Ferp_1002 Ferp_1003 Ferp_1003 Ferp_1004 Ferp_1004 Ferp_1040 Ferp_1040 Ferp_1044 Ferp_1044 Ferp_1163 Ferp_1163 Ferp_1164 Ferp_1164 Ferp_1189 Ferp_1189 Ferp_1233 Ferp_1233 Ferp_1321 Ferp_1321 Ferp_1484 Ferp_1484 Ferp_1566 Ferp_1566 Ferp_1567 Ferp_1567 Ferp_1579 Ferp_1579 Ferp_1675 Ferp_1675 Ferp_1684 Ferp_1684 Ferp_1685 Ferp_1685 Ferp_1686 Ferp_1686 Ferp_1687 Ferp_1687 Ferp_1688 Ferp_1688 Ferp_1792 Ferp_1792 Ferp_1793 Ferp_1793 Ferp_1907 Ferp_1907 Ferp_1940 Ferp_1940 Ferp_1941 Ferp_1941 Ferp_1942 Ferp_1942 Ferp_1943 Ferp_1943 Ferp_1944 Ferp_1944 Ferp_1945 Ferp_1945 Ferp_2035 Ferp_2035 Ferp_2180 Ferp_2180 Ferp_2239 Ferp_2239 Ferp_2316 Ferp_2316 Ferp_2317 Ferp_2317 Ferp_2318 Ferp_2318 Ferp_2467 Ferp_2467 Ferp_2550 Ferp_2550 Ferp_2551 Ferp_2551 Ferp_2552 Ferp_2552 Ferp_2553 Ferp_2553 Ferp_2554 Ferp_2554 Ferp_2555 Ferp_2555 Ferp_2556 Ferp_2556 Ferp_2557 Ferp_2557 Ferp_2558 Ferp_2558 Ferp_2559 Ferp_2559
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0083PFAM: AMP-dependent synthetase and ligase; KEGG: dal:Dalk_3104 AMP-dependent synthetase and ligase. (547 aa)
Ferp_0178PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: afu:AF1206 3-hydroxyacyl-CoA dehydrogenase (hbd-8). (310 aa)
Ferp_0397PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hna:Hneap_1592 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (330 aa)
Ferp_1002PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: chy:CHY_1292 3-hydroxybutyryl-CoA dehydrogenase. (288 aa)
Ferp_1003PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF1293 acyl-CoA dehydrogenase (acd-9). (381 aa)
Ferp_1004TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cbf:CLI_3339 acetyl-CoA acetyltransferase. (393 aa)
Ferp_1040PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro11181 naphthoate synthase. (310 aa)
Ferp_1044PFAM: AMP-dependent synthetase and ligase; KEGG: gwc:GWCH70_2629 AMP-dependent synthetase and ligase. (552 aa)
Ferp_1163PFAM: coenzyme A transferase; KEGG: oca:OCAR_6775 3-oxoadipate:succinyl-CoA transferase subunit B. (239 aa)
Ferp_1164PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A. (261 aa)
Ferp_1189Propanoyl-CoA C-acyltransferase; KEGG: afu:AF0438 acetyl-CoA acetyltransferase. (388 aa)
Ferp_1233PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B3915 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR. (250 aa)
Ferp_1321PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: deh:cbdb_A1349 rhodanese-like domain-containing protein. (132 aa)
Ferp_1484PFAM: AMP-dependent synthetase and ligase; KEGG: afu:AF0262 medium-chain acyl-CoA ligase (AlkK-2). (540 aa)
Ferp_1566PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF1026 acyl-CoA dehydrogenase (acd-7). (395 aa)
Ferp_1567PFAM: AMP-dependent synthetase and ligase; KEGG: chy:CHY_1731 long-chain-fatty-acid--CoA ligase. (534 aa)
Ferp_1579PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF2057 acyl-CoA dehydrogenase (acd-10). (383 aa)
Ferp_1675PFAM: AMP-dependent synthetase and ligase; KEGG: afu:AF2033 acyl-CoA synthetase. (542 aa)
Ferp_1684PFAM: FAD dependent oxidoreductase; KEGG: cma:Cmaq_0479 electron-transferring-flavoprotein dehydrogenase. (421 aa)
Ferp_1685KEGG: sfu:Sfum_3926 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (92 aa)
Ferp_1686PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pas:Pars_2103 acyl-CoA dehydrogenase domain-containing protein. (421 aa)
Ferp_1687PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ape:APE_0134.1 electron transfer flavoprotein beta-subunit. (255 aa)
Ferp_1688PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: pai:PAE3587 electron transfer flavoprotein alpha subunit (EtfA). (292 aa)
Ferp_1792PFAM: coenzyme A transferase; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A (GctA). (324 aa)
Ferp_1793PFAM: coenzyme A transferase; KEGG: pth:PTH_2045 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (265 aa)
Ferp_1907PFAM: Enoyl-CoA hydratase/isomerase; KEGG: hoh:Hoch_4783 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (246 aa)
Ferp_1940PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: afu:AF0287 electron transfer flavoprotein, subunit alpha (EtfA). (318 aa)
Ferp_1941PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: afu:AF0286 electron transfer flavoprotein, subunit beta (EtfB). (245 aa)
Ferp_1942PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; KEGG: afu:AF0285 3-hydroxyacyl-CoA dehydrogenase (hbd-2); Belongs to the enoyl-CoA hydratase/isomerase family. (652 aa)
Ferp_1943PFAM: protein of unknown function DUF35; KEGG: afu:AF0284 hypothetical protein. (167 aa)
Ferp_1944Propanoyl-CoA C-acyltransferase; PFAM: Beta-ketoacyl synthase; KEGG: afu:AF0283 acetyl-CoA acetyltransferase. (392 aa)
Ferp_1945PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF1141 acyl-CoA dehydrogenase (acd-8). (390 aa)
Ferp_2035PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cbk:CLL_A0373 3-hydroxybutyryl-CoA dehydratase. (214 aa)
Ferp_2180PFAM: AMP-dependent synthetase and ligase; KEGG: afu:AF0976 acetyl-CoA synthetase (acs-5). (561 aa)
Ferp_2239PFAM: AMP-dependent synthetase and ligase; KEGG: afu:AF1772 long-chain-fatty-acid--CoA ligase (FadD-7). (566 aa)
Ferp_2316PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: pas:Pars_2212 electron transfer flavoprotein, alpha subunit. (304 aa)
Ferp_2317PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: kcr:Kcr_0224 electron transfer flavoprotein alpha/beta-subunit. (252 aa)
Ferp_2318PFAM: NADH:flavin oxidoreductase/NADH oxidase; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tmz:Tmz1t_4043 NADH:flavin oxidoreductase/NADH oxidase. (646 aa)
Ferp_2467PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF0671 acyl-CoA dehydrogenase (acd-4). (415 aa)
Ferp_2550PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afu:AF0923 ferredoxin (fdx-5). (60 aa)
Ferp_2551PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF0964 acyl-CoA dehydrogenase (acd-6). (394 aa)
Ferp_2552PFAM: protein of unknown function DUF35; KEGG: afu:AF0965 hypothetical protein. (156 aa)
Ferp_2553PFAM: protein of unknown function DUF35; KEGG: afu:AF0966 hypothetical protein. (178 aa)
Ferp_2554KEGG: afu:AF0967 acetyl-CoA acetyltransferase. (400 aa)
Ferp_2555KEGG: afu:AF0968 acetyl-CoA acetyltransferase. (380 aa)
Ferp_2556PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afu:AF0273 sarcosine oxidase, subunit alpha (SoxA). (519 aa)
Ferp_2557PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pfu:PF1796 putative polyferredoxin. (162 aa)
Ferp_2558PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tsi:TSIB_0639 proline dehydrogenase, delta subunit. (90 aa)
Ferp_2559PFAM: FAD dependent oxidoreductase; KEGG: afu:AF0274 sarcosine oxidase, subunit beta (SoxB). (363 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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