STRINGSTRING
rpl39e rpl39e Ferp_0008 Ferp_0008 Ferp_0013 Ferp_0013 rpl18a rpl18a eif6 eif6 Ferp_1804 Ferp_1804 Ferp_1805 Ferp_1805 Ferp_1806 Ferp_1806 Ferp_1815 Ferp_1815 Ferp_1816 Ferp_1816 pth pth Ferp_1829 Ferp_1829 Ferp_1841 Ferp_1841 rpl37e rpl37e Ferp_1874 Ferp_1874 eif2b eif2b Ferp_1908 Ferp_1908 Ferp_1909 Ferp_1909 Ferp_1912 Ferp_1912 Ferp_1915 Ferp_1915 Ferp_1948 Ferp_1948 rps2 rps2 rps9 rps9 rpl13 rpl13 rpl18e rpl18e pcm pcm Ferp_1978 Ferp_1978 argS argS prf1 prf1 lysS lysS rpl31e rpl31e rpl40e rpl40e Ferp_2023 Ferp_2023 Ferp_2071 Ferp_2071 Ferp_2094 Ferp_2094 Ferp_2104 Ferp_2104 proS proS Ferp_2108 Ferp_2108 Ferp_2114 Ferp_2114 pheT pheT Ferp_2136 Ferp_2136 hisS hisS Ferp_2150 Ferp_2150 Ferp_2172 Ferp_2172 Ferp_2176 Ferp_2176 Ferp_2196 Ferp_2196 Ferp_2211 Ferp_2211 Ferp_2212 Ferp_2212 rps24e rps24e rps27ae rps27ae Ferp_2231 Ferp_2231 Ferp_2232 Ferp_2232 Ferp_2254 Ferp_2254 Ferp_2280 Ferp_2280 Ferp_2282 Ferp_2282 metG metG Ferp_2336 Ferp_2336 Ferp_2358 Ferp_2358 Ferp_2360 Ferp_2360 Ferp_2372 Ferp_2372 Ferp_2389 Ferp_2389 Ferp_2397 Ferp_2397 Ferp_2401 Ferp_2401 Ferp_2405 Ferp_2405 Ferp_2422 Ferp_2422 Ferp_2437 Ferp_2437 tuf tuf rps10 rps10 trpS trpS Ferp_2486 Ferp_2486 Ferp_2487 Ferp_2487 map map Ferp_2495 Ferp_2495 Ferp_2497 Ferp_2497 rps3ae rps3ae Ferp_2509 Ferp_2509 gatE gatE Ferp_2541 Ferp_2541 Ferp_2545 Ferp_2545 Ferp_0824 Ferp_0824 Ferp_0843 Ferp_0843 rps11 rps11 rps4 rps4 rps13 rps13 dys dys Ferp_0864 Ferp_0864 Ferp_0872 Ferp_0872 gatD gatD eif2a eif2a alaS alaS Ferp_0905 Ferp_0905 psmB psmB Ferp_0915 Ferp_0915 rpl10e rpl10e Ferp_0949 Ferp_0949 sepS sepS gatA gatA gatC gatC Ferp_0966 Ferp_0966 Ferp_0980 Ferp_0980 Ferp_1025 Ferp_1025 Ferp_1072 Ferp_1072 Ferp_1075 Ferp_1075 cheB cheB Ferp_1083 Ferp_1083 htpX-2 htpX-2 Ferp_1097 Ferp_1097 rpl3 rpl3 rpl4 rpl4 rpl23 rpl23 rpl2 rpl2 rps19p rps19p rpl22 rpl22 rps3 rps3 rpl29 rpl29 rps17 rps17 rpl14 rpl14 rpl24 rpl24 rps4e rps4e rpl5 rpl5 rps14 rps14 rps8 rps8 rpl6 rpl6 rpl32e rpl32e rpl19e rpl19e rpl18 rpl18 rps5 rps5 rpl30 rpl30 rpl15 rpl15 Ferp_1179 Ferp_1179 Ferp_1229 Ferp_1229 Ferp_1238 Ferp_1238 rps15 rps15 rps17e rps17e Ferp_1295 Ferp_1295 Ferp_1308 Ferp_1308 Ferp_1311 Ferp_1311 Ferp_1342 Ferp_1342 rpl11 rpl11 spt5 spt5 Ferp_1405 Ferp_1405 Ferp_1407 Ferp_1407 glyS glyS dphB dphB Ferp_1483 Ferp_1483 gltX gltX aspS aspS cobB-2 cobB-2 Ferp_1607 Ferp_1607 ileS ileS mobA mobA moaA moaA Ferp_1627 Ferp_1627 eif2g eif2g Ferp_1643 Ferp_1643 Ferp_1658 Ferp_1658 Ferp_1670 Ferp_1670 Ferp_1701 Ferp_1701 Ferp_1733 Ferp_1733 pheS pheS Ferp_1743 Ferp_1743 moaC moaC hemC hemC Ferp_1775 Ferp_1775 Ferp_1776 Ferp_1776 Ferp_1777 Ferp_1777 Ferp_1781 Ferp_1781 thrS thrS rps27e rps27e rpl44e rpl44e Ferp_1801 Ferp_1801 Ferp_1802 Ferp_1802 hypA hypA Ferp_0821 Ferp_0821 ef1b ef1b Ferp_0782 Ferp_0782 tyrS tyrS eif1a eif1a Ferp_0773 Ferp_0773 Ferp_0770 Ferp_0770 Ferp_0768 Ferp_0768 rpl30e rpl30e rps12 rps12 rps7 rps7 fusA fusA Ferp_0752 Ferp_0752 rps8e rps8e Ferp_0703 Ferp_0703 cobB cobB Ferp_0689 Ferp_0689 Ferp_0664 Ferp_0664 Ferp_0652 Ferp_0652 Ferp_0644 Ferp_0644 Ferp_0643 Ferp_0643 rpl7ae rpl7ae rps28e rps28e rpl24e rpl24e infB infB rps6e rps6e cysS cysS pan pan Ferp_0599 Ferp_0599 htpX htpX Ferp_0578 Ferp_0578 Ferp_0477 Ferp_0477 Ferp_0431 Ferp_0431 Ferp_0377 Ferp_0377 Ferp_0375 Ferp_0375 leuS leuS rpl37ae rpl37ae psmA psmA rpl15e rpl15e Ferp_0280 Ferp_0280 Ferp_0279 Ferp_0279 rpl21e rpl21e rpl12 rpl12 rpl10 rpl10 rpl1 rpl1 Ferp_0263 Ferp_0263 gatB gatB Ferp_0249 Ferp_0249 Ferp_0234 Ferp_0234 Ferp_0210 Ferp_0210 eif5a eif5a Ferp_0193 Ferp_0193 serS serS valS valS Ferp_0160 Ferp_0160 Ferp_0158 Ferp_0158 Ferp_0146 Ferp_0146 Ferp_0106 Ferp_0106 Ferp_0087 Ferp_0087 Ferp_0072 Ferp_0072 Ferp_0061 Ferp_0061 rps19e rps19e
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
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gene neighborhood
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co-expression
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rpl39ePFAM: Ribosomal protein L39e; KEGG: afu:AF2067 50S ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family. (50 aa)
Ferp_0008KEGG: afu:AF1019 hypothetical protein. (422 aa)
Ferp_0013PFAM: thioesterase superfamily protein; KEGG: sid:M164_2675 thioesterase superfamily protein. (117 aa)
rpl18aPFAM: Ribosomal LX protein; KEGG: afu:AF2064 50S ribosomal protein LX. (58 aa)
eif6Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. (218 aa)
Ferp_1804TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: afu:AF1368 hydrogenase expression/formation protein (HypB). (219 aa)
Ferp_1805TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: ton:TON_0283 HypC hydrogenase expression/formation protein. (71 aa)
Ferp_1806TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: afu:AF1370 hydrogenase expression/formation protein (HypD). (353 aa)
Ferp_1815PFAM: peptidase U62 modulator of DNA gyrase; KEGG: afu:AF0655 hypothetical protein. (425 aa)
Ferp_1816PFAM: peptidase U62 modulator of DNA gyrase; KEGG: afu:AF0656 antibiotic maturation protein (PmbA). (400 aa)
pthAminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. (120 aa)
Ferp_1829PFAM: RIO-like kinase; SMART: protein of unknown function RIO1; KEGG: afu:AF2426 hypothetical protein. (283 aa)
Ferp_1841PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: afu:AF1405 hypothetical protein. (156 aa)
rpl37eRibosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (59 aa)
Ferp_1874PFAM: ABC-1 domain protein; KEGG: gwc:GWCH70_1612 ABC-1 domain protein. (359 aa)
eif2bTranslation initiation factor aIF-2, beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family. (135 aa)
Ferp_1908KEGG: rci:RCIX256 hypothetical protein. (1390 aa)
Ferp_1909KEGG: mvn:Mevan_0986 hypothetical protein. (1122 aa)
Ferp_1912PFAM: GCN5-related N-acetyltransferase; KEGG: cbh:CLC_0962 acetyltransferase. (165 aa)
Ferp_1915PFAM: glycosyl transferase group 1; KEGG: cby:CLM_3503 glycosyl transferase, group 1 family. (374 aa)
Ferp_1948TIGRFAM: molybdenum cofactor synthesis domain protein; MoaD family protein; PFAM: MoeA domain protein domain I and II; thiamineS protein; molybdopterin binding domain; MoeA domain protein domain IV; KEGG: mac:MA4087 molybdenum cofactor biosynthesis protein MoeA2. (467 aa)
rps2TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: afu:AF1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (204 aa)
rps9TIGRFAM: ribosomal protein S9P; PFAM: ribosomal protein S9; KEGG: afu:AF1129 30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (132 aa)
rpl13Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (157 aa)
rpl18ePFAM: ribosomal protein L15; KEGG: mfe:Mefer_0486 ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family. (125 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (215 aa)
Ferp_1978TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71 ATP-binding region; KEGG: afu:AF1666 hypothetical protein. (221 aa)
argSKEGG: afu:AF0894 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (547 aa)
prf1Peptide chain release factor 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (405 aa)
lysSKEGG: afu:AF1216 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family. (491 aa)
rpl31ePFAM: Ribosomal protein L31e; KEGG: afu:AF2066 50S ribosomal protein L31E (rpl31E); Belongs to the ribosomal protein L31e family. (89 aa)
rpl40eKEGG: afu:AF1430 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. (50 aa)
Ferp_2023Sep-tRNA; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family. (394 aa)
Ferp_2071PFAM: peptidase M48 Ste24p; KEGG: afu:AF0925 hypothetical protein. (321 aa)
Ferp_2094PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: ton:TON_1908 subtilisin-like serine protease precursor. (425 aa)
Ferp_2104TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: mbu:Mbur_1415 molybdopterin converting factor small subunit MoaD. (91 aa)
proSprolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (475 aa)
Ferp_2108Diphthamide biosynthesis protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. (316 aa)
Ferp_2114S-layer domain-like protein; KEGG: afu:AF1231 hypothetical protein. (589 aa)
pheTKEGG: afu:AF1424 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5; B3/4 domain protein. (547 aa)
Ferp_2136KEGG: afu:AF1441 hypothetical protein. (200 aa)
hisSKEGG: afu:AF1642 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family. (409 aa)
Ferp_2150Hypothetical protein; KEGG: pmc:P9515_18871 polyphosphate kinase. (131 aa)
Ferp_2172TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: saz:Sama_1999 ribosomal protein S6 modification protein, putative. (297 aa)
Ferp_2176PFAM: protein of unknown function DUF111; KEGG: afu:AF2097 hypothetical protein; Belongs to the LarC family. (380 aa)
Ferp_2196KEGG: mja:MJ0123 hypothetical protein. (97 aa)
Ferp_2211PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: afu:AF0553 thiamine biosynthesis protein (ThiF). (263 aa)
Ferp_2212TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: pmx:PERMA_0222 MoaD family protein. (89 aa)
rps24ePFAM: Ribosomal protein S24e; KEGG: afu:AF1114 SSU ribosomal protein S24E (rps24E); Belongs to the eukaryotic ribosomal protein eS24 family. (100 aa)
rps27aePFAM: Ribosomal protein S27a; KEGG: afu:AF1113 SSU ribosomal protein S27AE (rps27AE); Belongs to the eukaryotic ribosomal protein eS31 family. (60 aa)
Ferp_2231PFAM: RIO-like kinase; KEGG: afu:AF0665 O-sialoglycoprotein endopeptidase, putative. (192 aa)
Ferp_2232PFAM: histone deacetylase superfamily; KEGG: mtp:Mthe_0463 histone deacetylase superfamily protein. (274 aa)
Ferp_2254KEGG: afu:AF0737 hypothetical protein. (80 aa)
Ferp_2280TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: afu:AF0722 cobalt-precorrin-6Y C(5)-methyltransferase. (180 aa)
Ferp_2282PFAM: molybdopterin biosynthesis MoaE protein; KEGG: afu:AF2179 molybdopterin converting factor, subunit 2 (MoaE). (222 aa)
metGmethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (658 aa)
Ferp_2336TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: pai:PAE2580 hypothetical protein. (98 aa)
Ferp_2358KEGG: afu:AF0418 hypothetical protein. (173 aa)
Ferp_2360PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: afu:AF2038 hypothetical protein. (646 aa)
Ferp_2372Hypothetical protein; KEGG: hma:rrnAC0428 putative sulfatase. (113 aa)
Ferp_2389PFAM: glycosyl transferase group 1; KEGG: hmu:Hmuk_2757 glycosyl transferase group 1. (391 aa)
Ferp_2397TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: mse:Msed_1255 dTDP-4-dehydrorhamnose reductase. (290 aa)
Ferp_2401KEGG: afu:AF0323b dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme. (166 aa)
Ferp_2405PFAM: glycosyl transferase family 2; KEGG: mbn:Mboo_1748 glycosyl transferase family protein. (338 aa)
Ferp_2422PFAM: glycosyl transferase group 1; KEGG: afu:AF0617 LPS biosynthesis protein, putative. (355 aa)
Ferp_2437PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: afu:AF0380 transmembrane oligosaccharyl transferase, putative. (838 aa)
tufTranslation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (423 aa)
rps10Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (106 aa)
trpStryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). (429 aa)
Ferp_2486TIGRFAM: small GTP-binding protein; PFAM: TGS domain protein; GTP-binding protein HSR1-related; KEGG: afu:AF2146 GTP-binding protein. (354 aa)
Ferp_2487PFAM: histone deacetylase superfamily; KEGG: afu:AF1286 acetoin utilization protein, putative. (278 aa)
mapMethionine aminopeptidase, type II; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase archaeal type 2 subfamily. (285 aa)
Ferp_2495PFAM: peptidase M24; KEGG: afu:AF2034 X-Pro aminopeptidase (PepQ); Belongs to the peptidase M24B family. (367 aa)
Ferp_2497PFAM: peptidase zinc-dependent; KEGG: neq:NEQ451 hypothetical protein. (164 aa)
rps3aePFAM: ribosomal protein S3Ae; KEGG: afu:AF2320 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (211 aa)
Ferp_2509PFAM: YYY membrane protein; KEGG: mba:Mbar_A0504 hypothetical protein. (616 aa)
gatEaspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (612 aa)
Ferp_2541PFAM: band 7 protein; SMART: band 7 protein; KEGG: afu:AF1420 membrane protein. (256 aa)
Ferp_2545PFAM: peptidase M24; creatinase; KEGG: pfu:PF0747 putative proline dipeptidase. (372 aa)
Ferp_0824TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: afu:AF0739 ribosomal protein S18 alanine acetyltransferase. (143 aa)
Ferp_0843KEGG: afu:AF2191 hypothetical protein. (122 aa)
rps11Ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (133 aa)
rps4Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (171 aa)
rps13Ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (147 aa)
dysDeoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. (322 aa)
Ferp_0864PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mhu:Mhun_1298 ATPase. (1071 aa)
Ferp_0872KEGG: mhu:Mhun_1307 heat shock protein HtpX. (215 aa)
gatDglutamyl-tRNA(Gln) amidotransferase, subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (406 aa)
eif2aTranslation initiation factor 2, alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. (265 aa)
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (901 aa)
Ferp_0905PFAM: alpha/beta hydrolase fold; KEGG: afu:AF1706 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase (PcbD). (262 aa)
psmBProteasome endopeptidase complex, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (210 aa)
Ferp_0915TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: afu:AF2253 molybdopterin-guanine dinucleotide biosynthesis protein B (MobB). (158 aa)
rpl10eTIGRFAM: ribosomal protein L10.e; PFAM: Ribosomal protein L10e/L16; KEGG: afu:AF1339 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. (174 aa)
Ferp_0949TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: afu:AF0372 hypothetical protein. (220 aa)
sepSO-phosphoseryl-tRNA(Cys) synthetase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys). (523 aa)
gatAglutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (459 aa)
gatCglutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (93 aa)
Ferp_0966PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: afu:AF1361 arsenate reductase (ArsC). (130 aa)
Ferp_0980Transcriptional regulator, XRE family; PFAM: MCM family protein; helix-turn-helix domain protein; SMART: MCM family protein; Hedgehog/intein hint domain protein; helix-turn-helix domain protein; KEGG: ton:TON_0043 hypothetical cell division control protein. (1168 aa)
Ferp_1025KEGG: afu:AF0705 hypothetical protein; Belongs to the peptidase S16 family. (604 aa)
Ferp_1072MCP methyltransferase, CheR-type; KEGG: afu:AF1037 chemotaxis protein methyltransferase (CheR); PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type. (267 aa)
Ferp_1075CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: afu:AF1040 chemotaxis histidine kinase (CheA). (666 aa)
cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)
Ferp_1083PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: afu:AF1322 hypothetical protein. (476 aa)
htpX-2PFAM: peptidase M48 Ste24p; KEGG: afu:AF0235 heat shock protein (HtpX); Belongs to the peptidase M48B family. (329 aa)
Ferp_1097TIGRFAM: peptidase S26B, signal peptidase; KEGG: afu:AF1791 signal sequence peptidase (sec11). (164 aa)
rpl3Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (329 aa)
rpl450S ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (251 aa)
rpl23Ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (82 aa)
rpl2Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (237 aa)
rps19pRibosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (133 aa)
rpl22Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (153 aa)
rps3Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (223 aa)
rpl29TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: afu:AF1918 50S ribosomal protein L29P (rpl29P); Belongs to the universal ribosomal protein uL29 family. (63 aa)
rps17Ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (106 aa)
rpl1450S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (132 aa)
rpl24Ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. (120 aa)
rps4ePFAM: Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; KOW domain protein; SMART: RNA-binding S4 domain protein; KOW domain protein; KEGG: afu:AF1913 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. (232 aa)
rpl5Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (166 aa)
rps14Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. (51 aa)
rps8Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (129 aa)
rpl6Ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (183 aa)
rpl32ePFAM: Ribosomal protein L32e; KEGG: afu:AF1908 50S ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa)
rpl19eRibosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (148 aa)
rpl18Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (185 aa)
rps5Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. (196 aa)
rpl30TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: afu:AF1904 50S ribosomal protein L30P. (152 aa)
rpl15Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (176 aa)
Ferp_1179PFAM: GCN5-related N-acetyltransferase; KEGG: eba:ebA5292 transcriptional regulator. (154 aa)
Ferp_1229PFAM: Methyltransferase type 11; thiamineS protein; KEGG: hma:rrnB0259 cyclopropane-fatty-acyl-phospholipid synthase. (317 aa)
Ferp_1238KEGG: afu:AF0375 hypothetical protein. (212 aa)
rps15PFAM: Ribosomal S13S15 domain protein; ribosomal protein S15; KEGG: afu:AF0801 30S ribosomal protein S15P. (152 aa)
rps17ePFAM: Ribosomal protein S17e; KEGG: afu:AF0911 SSU ribosomal protein S17E (rps17E); Belongs to the eukaryotic ribosomal protein eS17 family. (65 aa)
Ferp_1295KEGG: afu:AF2195 deoxyhypusine synthase (dys1-1); TIGRFAM: deoxyhypusine synthase; PFAM: deoxyhypusine synthase. (299 aa)
Ferp_1308Protein of unknown function DUF265; Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency; Belongs to the THEP1 NTPase family. (172 aa)
Ferp_1311TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: afu:AF0265 molybdenum cofactor biosynthesis protein (MoaB). (167 aa)
Ferp_1342PFAM: band 7 protein; SMART: band 7 protein; KEGG: mae:Maeo_0253 band 7 protein. (290 aa)
rpl11Ribosomal protein L11-like protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (159 aa)
spt5NusG antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (151 aa)
Ferp_1405PFAM: NUDIX hydrolase; KEGG: afu:AF1234 mutator protein MutT (MutT). (137 aa)
Ferp_1407PFAM: Exosortase EpsH-related; KEGG: afu:AF2046 cytochrome oxidase, subunit I, putative. (248 aa)
glySglycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). (565 aa)
dphBDiphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. (255 aa)
Ferp_1483PFAM: histone deacetylase superfamily; KEGG: pth:PTH_0916 deacetylases. (240 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (551 aa)
aspSaspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn). (429 aa)
cobB-2PFAM: Silent information regulator protein Sir2; KEGG: afu:AF0112 Sir2 family transcriptional regulator; Belongs to the sirtuin family. Class III subfamily. (253 aa)
Ferp_1607PFAM: glycosyl transferase group 1; KEGG: afu:AF1728 galactosyltransferase. (333 aa)
ileSisoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1023 aa)
mobAMolybdopterin-guanine dinucleotide biosynthesis protein A (MobA); Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. (200 aa)
moaAMolybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family. (293 aa)
Ferp_1627KEGG: mba:Mbar_A1191 hypothetical protein. (45 aa)
eif2gProtein synthesis factor GTP-binding protein; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. (408 aa)
Ferp_1643PFAM: YYY membrane protein; KEGG: mma:MM_0839 hypothetical protein. (697 aa)
Ferp_1658PFAM: glycosyl transferase group 1; KEGG: aae:aq_1141 hypothetical protein. (344 aa)
Ferp_1670KEGG: afu:AF2198 hypothetical protein. (118 aa)
Ferp_1701TIGRFAM: peptidase S26B, signal peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: afu:AF1655 signal sequence peptidase, putative. (285 aa)
Ferp_1733PFAM: NUDIX hydrolase; KEGG: aba:Acid345_1350 NUDIX hydrolase. (154 aa)
pheSKEGG: afu:AF1955 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily. (477 aa)
Ferp_1743TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: cma:Cmaq_0881 PfpI family intracellular peptidase. (183 aa)
moaCMolybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (155 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. (292 aa)
Ferp_1775Hypothetical protein; KEGG: mka:MK0125 Zn-ribbon containing protein. (91 aa)
Ferp_1776KEGG: afu:AF1004 hypothetical protein. (401 aa)
Ferp_1777KEGG: afu:AF1004 hypothetical protein. (81 aa)
Ferp_1781PFAM: ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: AAA ATPase; KEGG: afu:AF0004 putative ATPase RIL. (587 aa)
thrSTIGRFAM: threonyl-tRNA synthetase; PFAM: Threonyl-tRNA synthetase editing domain protein; tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: afu:AF0548 threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (618 aa)
rps27ePFAM: Ribosomal protein S27E; KEGG: afu:AF1334 30S ribosomal protein S27e. (57 aa)
rpl44eRibosomal protein L44E; Binds to the 23S rRNA. (92 aa)
Ferp_1801TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: afu:AF1365 hydrogenase expression/formation protein (HypE). (344 aa)
Ferp_1802TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: afu:AF1366 hydrogenase expression/formation regulatory protein (HypF). (745 aa)
hypAHydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (115 aa)
Ferp_0821PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: afu:AF0477 AAA ATPase family protein; Belongs to the AAA ATPase family. (408 aa)
ef1bTranslation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (88 aa)
Ferp_0782PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; KEGG: afu:AF0744 GTP-binding protein. (525 aa)
tyrStyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily. (324 aa)
eif1aTranslation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (96 aa)
Ferp_0773KEGG: afu:AF1804 hypothetical protein; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1. (262 aa)
Ferp_0770PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: afu:AF1521 hypothetical protein. (193 aa)
Ferp_0768PFAM: protein of unknown function DUF107; peptidase S14 ClpP; KEGG: afu:AF1781 nodulation protein NfeD (NfeD). (424 aa)
rpl30ePFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: afu:AF1890 50S ribosomal protein L30E (rpl30E); Belongs to the eukaryotic ribosomal protein eL30 family. (94 aa)
rps12Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (142 aa)
rps7Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (194 aa)
fusATranslation elongation factor aEF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...] (728 aa)
Ferp_0752TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; KEGG: mfe:Mefer_1467 molybdenum cofactor synthesis domain protein. (534 aa)
rps8eTIGRFAM: ribosomal protein S8e; PFAM: Ribosomal protein S8E; KEGG: afu:AF2152 30S ribosomal protein S8e. (128 aa)
Ferp_0703PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: tsi:TSIB_0762 predicted metalloprotease. (130 aa)
cobBPFAM: Silent information regulator protein Sir2; KEGG: pis:Pisl_0793 NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. (235 aa)
Ferp_0689PFAM: thiamineS protein; KEGG: tsi:TSIB_1624 hypothetical protein. (84 aa)
Ferp_0664TIGRFAM: peptidase S26B, signal peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: sto:ST1554 hypothetical protein. (225 aa)
Ferp_0652PFAM: histone deacetylase superfamily; KEGG: afu:AF0130 acetylpolyamine aminohydrolase (AphA). (359 aa)
Ferp_0644PFAM: alpha/beta hydrolase fold; KEGG: afu:AF1537 carboxylesterase (est-2). (245 aa)
Ferp_0643Sigma 54 interacting domain protein; KEGG: afu:AF0364 ATP-dependent protease Lon; TIGRFAM: peptidase S16, Lon-like protease; PFAM: peptidase S16 lon domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase; Belongs to the peptidase S16 family. (618 aa)
rpl7aeRibosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (121 aa)
rps28ePFAM: Ribosomal protein S28e; KEGG: afu:AF0765 30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
rpl24eRibosomal protein L24E; Binds to the 23S rRNA. (59 aa)
infBTranslation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. (588 aa)
rps6ePFAM: Ribosomal protein S6e; KEGG: afu:AF0511 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (134 aa)
cysSKEGG: afu:AF0411 cysteinyl-tRNA synthetase (CysS); TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR. (467 aa)
pan26S proteasome subunit P45 family; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-2 [...] (400 aa)
Ferp_0599PFAM: peptidase M24; creatinase; KEGG: sat:SYN_01652 Xaa-pro aminopeptidase. (372 aa)
htpXPFAM: peptidase M48 Ste24p; KEGG: afu:AF0235 heat shock protein (HtpX); Belongs to the peptidase M48B family. (334 aa)
Ferp_0578PFAM: type II secretion system protein E; KEGG: rci:RCIX2217 putative type II secretion system protein. (1028 aa)
Ferp_0477Hypothetical protein; KEGG: cce:Ccel_2696 filamentation induced by cAMP protein Fic. (185 aa)
Ferp_0431PFAM: peptidase M10A and M12B matrixin and adamalysin; KEGG: mtp:Mthe_1183 hypothetical protein. (232 aa)
Ferp_0377PFAM: histone deacetylase superfamily; KEGG: afu:AF0690 hypothetical protein. (242 aa)
Ferp_0375Cellulase; PFAM: peptidase M42 family protein; KEGG: afu:AF1795 endoglucanase (CelM). (344 aa)
leuSTIGRFAM: leucyl-tRNA synthetase; KEGG: afu:AF2421 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (929 aa)
rpl37aeRibosomal protein L37a; Binds to the 23S rRNA. (86 aa)
psmAProteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (241 aa)
rpl15ePFAM: Ribosomal protein L15e; KEGG: afu:AF2319 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. (195 aa)
Ferp_0280Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: afu:AF1721 signal-transducing histidine kinase. (445 aa)
Ferp_0279Putative periplasmic ligand-binding sensor protein; PFAM: CHASE4 domain protein; KEGG: afu:AF1721 signal-transducing histidine kinase. (80 aa)
rpl21ePFAM: Ribosomal protein L21e; KEGG: afu:AF1529 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (101 aa)
rpl12Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
rpl10Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (336 aa)
rpl1Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (215 aa)
Ferp_0263Putative PAS/PAC sensor protein; KEGG: afu:AF0448 signal-transducing histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GAF domain protein. (778 aa)
gatBglutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (473 aa)
Ferp_0249KEGG: pfu:PF2049 hypothetical protein. (211 aa)
Ferp_0234PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; KEGG: rci:RCIX1104 putative proteinase; Belongs to the peptidase S8 family. (730 aa)
Ferp_0210KEGG: mja:MJ1282 hypothetical protein. (427 aa)
eif5aTranslation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. (127 aa)
Ferp_0193PFAM: thioesterase superfamily protein; KEGG: tsi:TSIB_1673 PaaI related protein, phenylacetic acid degradation-related. (125 aa)
serSseryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (450 aa)
valSvalyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily. (864 aa)
Ferp_0160Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; peptidase M50; SMART: CBS domain containing protein; KEGG: afu:AF0332 hypothetical protein; Belongs to the peptidase M50B family. (349 aa)
Ferp_0158TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; KEGG: afu:AF0914 translation initiation factor SUI1; Belongs to the SUI1 family. (102 aa)
Ferp_0146KEGG: afu:AF1966 hypothetical protein. (189 aa)
Ferp_0106PFAM: peptidase M50; KEGG: afu:AF0053 hypothetical protein. (343 aa)
Ferp_0087PFAM: NUDIX hydrolase; KEGG: sth:STH3197 MutT-like protein. (139 aa)
Ferp_0072PFAM: protein of unknown function DUF114; KEGG: pho:PH0282 hypothetical protein. (277 aa)
Ferp_0061PFAM: Peptidase A24B, FlaK domain protein; peptidase A24A prepilin type IV; KEGG: afu:AF0936 hypothetical protein. (235 aa)
rps19eRibosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (149 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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