STRINGSTRING
Ferp_1793 Ferp_1793 rpiA rpiA Ferp_1163 Ferp_1163 Ferp_1164 Ferp_1164 Ferp_1337 Ferp_1337 Ferp_1568 Ferp_1568 Ferp_1792 Ferp_1792 Ferp_2260 Ferp_2260 Ferp_2476 Ferp_2476
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_1793PFAM: coenzyme A transferase; KEGG: pth:PTH_2045 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (265 aa)
rpiARibose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (220 aa)
Ferp_1163PFAM: coenzyme A transferase; KEGG: oca:OCAR_6775 3-oxoadipate:succinyl-CoA transferase subunit B. (239 aa)
Ferp_1164PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A. (261 aa)
Ferp_1337Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily. (343 aa)
Ferp_1568PFAM: protein of unknown function DUF162; KEGG: afu:AF0811 hypothetical protein. (357 aa)
Ferp_1792PFAM: coenzyme A transferase; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A (GctA). (324 aa)
Ferp_2260PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: sto:ST0172 hypothetical protein. (207 aa)
Ferp_2476Translation initiation factor, aIF-2BII family; KEGG: afu:AF2037 translation initiation factor IF-2B subunit delta; TIGRFAM: translation initiation factor, aIF-2BII family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family. (313 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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