STRINGSTRING
Ferp_0397 Ferp_0397 Ferp_1163 Ferp_1163 Ferp_1164 Ferp_1164 Ferp_1792 Ferp_1792 Ferp_1793 Ferp_1793
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0397PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hna:Hneap_1592 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (330 aa)
Ferp_1163PFAM: coenzyme A transferase; KEGG: oca:OCAR_6775 3-oxoadipate:succinyl-CoA transferase subunit B. (239 aa)
Ferp_1164PFAM: coenzyme A transferase; KEGG: bpt:Bpet3678 putative glutaconate CoA transferase subunit A. (261 aa)
Ferp_1792PFAM: coenzyme A transferase; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A (GctA). (324 aa)
Ferp_1793PFAM: coenzyme A transferase; KEGG: pth:PTH_2045 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (265 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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