STRINGSTRING
Ferp_0977 Ferp_0977 Ferp_0978 Ferp_0978 Ferp_1004 Ferp_1004 Ferp_1023 Ferp_1023 Ferp_1036 Ferp_1036 Ferp_1189 Ferp_1189 Ferp_1296 Ferp_1296 mvk mvk Ferp_1382 Ferp_1382 Ferp_1502 Ferp_1502 fni fni Ferp_1542 Ferp_1542 Ferp_1944 Ferp_1944 uppS uppS Ferp_2323 Ferp_2323 Ferp_2450 Ferp_2450 Ferp_2554 Ferp_2554 Ferp_2555 Ferp_2555
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ferp_0977TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; Hydroxymethylglutaryl-coenzyme A synthase domain; KEGG: tac:Ta1455 hypothetical protein; Belongs to the thiolase-like superfamily. UPF0219 family. (345 aa)
Ferp_0978KEGG: afu:AF2416 acetyl-CoA acetyltransferase. (382 aa)
Ferp_1004TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cbf:CLI_3339 acetyl-CoA acetyltransferase. (393 aa)
Ferp_1023PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: afu:AF0707 hypothetical protein. (198 aa)
Ferp_1036Propanoyl-CoA C-acyltransferase; KEGG: afu:AF0018 3-ketoacyl-CoA thiolase (AcaB-1). (400 aa)
Ferp_1189Propanoyl-CoA C-acyltransferase; KEGG: afu:AF0438 acetyl-CoA acetyltransferase. (388 aa)
Ferp_1296PFAM: Polyprenyl synthetase; KEGG: afu:AF1551 octaprenyl-diphosphate synthase (IspB); Belongs to the FPP/GGPP synthase family. (301 aa)
mvkMevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (295 aa)
Ferp_1382PFAM: aspartate/glutamate/uridylate kinase; KEGG: afu:AF2288 acetylglutamate kinase, putative. (238 aa)
Ferp_1502Dimethylallyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: afu:AF2286 bifunctional short chain isoprenyl diphosphate synthase (IdsA); Belongs to the FPP/GGPP synthase family. (318 aa)
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (354 aa)
Ferp_1542TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: afu:AF1736 3-hydroxy-3-methylglutaryl-coenzyme A reductase (MvaA). (419 aa)
Ferp_1944Propanoyl-CoA C-acyltransferase; PFAM: Beta-ketoacyl synthase; KEGG: afu:AF0283 acetyl-CoA acetyltransferase. (392 aa)
uppSUndecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (251 aa)
Ferp_2323Propanoyl-CoA C-acyltransferase; KEGG: mth:MTH793 acetyl-CoA acetyltransferase. (388 aa)
Ferp_2450TIGRFAM: acetyl-CoA acetyltransferase; KEGG: afu:AF1197 3-ketoacyl-CoA thiolase (FadA-2). (425 aa)
Ferp_2554KEGG: afu:AF0967 acetyl-CoA acetyltransferase. (400 aa)
Ferp_2555KEGG: afu:AF0968 acetyl-CoA acetyltransferase. (380 aa)
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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