(8 nodes) Prosthetic group binding network (Dickeya zeae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACZ78055.1	KEGG: pct:PC1_2909 acyl carrier protein. (73 aa)
	ACZ74984.1	KEGG: dze:Dd1591_0075 hypothetical protein. (88 aa)
	acpP	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (78 aa)
	citD	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase. (96 aa)
	mdcC	Malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism. (99 aa)
	citD-2	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase. (96 aa)
	ACZ78994.1	KEGG: eca:ECA4504 putative acyl carrier protein. (88 aa)
	acpP-2	Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (84 aa)

Your Current Organism:

Dickeya zeae

NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACZ78994.1	acpP	Dd586_4168	Dd586_1587	KEGG: eca:ECA4504 putative acyl carrier protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.917
ACZ78994.1	acpP-2	Dd586_4168	Dd586_4169	KEGG: eca:ECA4504 putative acyl carrier protein.	Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	0.994
acpP	ACZ78994.1	Dd586_1587	Dd586_4168	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	KEGG: eca:ECA4504 putative acyl carrier protein.	0.917
acpP	acpP-2	Dd586_1587	Dd586_4169	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	0.900
acpP-2	ACZ78994.1	Dd586_4169	Dd586_4168	Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	KEGG: eca:ECA4504 putative acyl carrier protein.	0.994
acpP-2	acpP	Dd586_4169	Dd586_1587	Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.900
citD	citD-2	Dd586_2261	Dd586_2563	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.	0.900
citD-2	citD	Dd586_2563	Dd586_2261	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.	Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.	0.900