STRINGSTRING
ACZ77900.1 ACZ77900.1 ACZ75961.1 ACZ75961.1 ACZ76070.1 ACZ76070.1 ACZ76507.1 ACZ76507.1 ACZ77161.1 ACZ77161.1 ACZ77583.1 ACZ77583.1 ACZ78508.1 ACZ78508.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACZ77900.1TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: dze:Dd1591_1109 ferredoxin, 2Fe-2S type, ISC system. (111 aa)
ACZ75961.1PFAM: ferredoxin; KEGG: dze:Dd1591_3023 ferredoxin. (86 aa)
ACZ76070.1TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: dze:Dd1591_2915 succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (238 aa)
ACZ76507.1PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: dze:Dd1591_1679 MOSC domain containing protein. (367 aa)
ACZ77161.1PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dze:Dd1591_2372 ferredoxin. (334 aa)
ACZ77583.1NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (908 aa)
ACZ78508.1KEGG: dze:Dd1591_0381 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (245 aa)
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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