STRINGSTRING
ACZ75077.1 ACZ75077.1 ACZ75092.1 ACZ75092.1 ACZ75440.1 ACZ75440.1 deoC deoC sbcD sbcD apt apt ACZ76052.1 ACZ76052.1 ACZ76393.1 ACZ76393.1 ACZ78906.1 ACZ78906.1 ACZ78581.1 ACZ78581.1 pgi pgi ACZ78328.1 ACZ78328.1 ACZ78200.1 ACZ78200.1 gpt gpt ACZ78028.1 ACZ78028.1 ACZ77956.1 ACZ77956.1 ACZ77820.1 ACZ77820.1 ACZ77802.1 ACZ77802.1 lacZ lacZ cdd cdd ACZ77314.1 ACZ77314.1 serS serS ACZ76411.1 ACZ76411.1 ACZ76496.1 ACZ76496.1 ACZ76495.1 ACZ76495.1 pdxY pdxY pncB pncB ACZ76494.1 ACZ76494.1 ACZ74948.1 ACZ74948.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACZ75077.1KEGG: dze:Dd1591_3931 protein tyrosine/serine phosphatase. (260 aa)
ACZ75092.1Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: dze:Dd1591_3908 porphobilinogen synthase; Belongs to the ALAD family. (340 aa)
ACZ75440.1PFAM: DoxX family protein; KEGG: dze:Dd1591_3519 DoxX family protein. (131 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. (259 aa)
sbcDNuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (410 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (182 aa)
ACZ76052.1TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: dze:Dd1591_2933 phosphoglucomutase, alpha-D-glucose phosphate-specific. (547 aa)
ACZ76393.1TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: dze:Dd1591_1563 flagellar hook-associated protein 3. (309 aa)
ACZ78906.1KEGG: dda:Dd703_3918 hypothetical protein. (348 aa)
ACZ78581.1PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: dze:Dd1591_0308 FKBP-type peptidyl-prolyl isomerase domain protein. (285 aa)
pgiPFAM: phosphoglucose isomerase (PGI); KEGG: dze:Dd1591_0373 glucose-6-phosphate isomerase; Belongs to the GPI family. (549 aa)
ACZ78328.1KEGG: dze:Dd1591_0644 hypothetical protein. (394 aa)
ACZ78200.1PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: dze:Dd1591_0780 peptidylprolyl isomerase FKBP-type. (206 aa)
gptXanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. (152 aa)
ACZ78028.1PFAM: Catalase related subgroup; Catalase domain protein; KEGG: dze:Dd1591_0973 catalase; Belongs to the catalase family. (515 aa)
ACZ77956.1PFAM: DoxX family protein; KEGG: dda:Dd703_2799 DoxX family protein. (144 aa)
ACZ77820.1PFAM: protein of unknown function UPF0005; KEGG: dze:Dd1591_1221 protein of unknown function UPF0005; Belongs to the BI1 family. (219 aa)
ACZ77802.1PFAM: DoxX family protein; KEGG: dze:Dd1591_1247 DoxX family protein. (140 aa)
lacZPFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: dze:Dd1591_2733 glycoside hydrolase family 2 TIM barrel; Belongs to the glycosyl hydrolase 2 family. (1036 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. (295 aa)
ACZ77314.1PFAM: protein of unknown function UPF0005; KEGG: dze:Dd1591_2518 protein of unknown function UPF0005; Belongs to the BI1 family. (236 aa)
serSseryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (431 aa)
ACZ76411.1Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (280 aa)
ACZ76496.1PFAM: porin Gram-negative type; KEGG: dda:Dd703_1637 porin gram-negative type; Belongs to the Gram-negative porin family. (361 aa)
ACZ76495.1PFAM: porin Gram-negative type; KEGG: dze:Dd1591_1666 porin gram-negative type. (361 aa)
pdxYPyridoxal kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP. (286 aa)
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (401 aa)
ACZ76494.1PFAM: porin Gram-negative type; KEGG: dda:Dd703_1637 porin gram-negative type. (359 aa)
ACZ74948.1KEGG: dda:Dd703_0066 hypothetical protein. (585 aa)
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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