STRINGSTRING
Celf_1058 Celf_1058 Celf_1439 Celf_1439 Celf_1854 Celf_1854 Celf_2126 Celf_2126 Celf_2127 Celf_2127 Celf_2175 Celf_2175 Celf_2554 Celf_2554 Celf_2555 Celf_2555 Celf_2556 Celf_2556 Celf_2557 Celf_2557 Celf_2558 Celf_2558 Celf_2559 Celf_2559 Celf_2560 Celf_2560 Celf_2564 Celf_2564 Celf_2565 Celf_2565 Celf_2566 Celf_2566 Celf_2584 Celf_2584 Celf_2628 Celf_2628 Celf_2629 Celf_2629 Celf_2630 Celf_2630 Celf_2631 Celf_2631 Celf_2632 Celf_2632 Celf_2633 Celf_2633 Celf_2634 Celf_2634 Celf_2635 Celf_2635 Celf_2644 Celf_2644 Celf_2645 Celf_2645 Celf_2646 Celf_2646 Celf_2757 Celf_2757 Celf_2758 Celf_2758 Celf_2832 Celf_2832 Celf_2839 Celf_2839 Celf_2840 Celf_2840 Celf_2841 Celf_2841 Celf_2842 Celf_2842 Celf_2843 Celf_2843 Celf_2846 Celf_2846 Celf_2960 Celf_2960 Celf_3001 Celf_3001 Celf_3004 Celf_3004 Celf_3005 Celf_3005 Celf_3192 Celf_3192 Celf_3194 Celf_3194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_1058PFAM: nitroreductase; KEGG: nitroreductase. (213 aa)
Celf_1439PFAM: AMP-dependent synthetase and ligase; KEGG: AMP-dependent synthetase and ligase. (604 aa)
Celf_1854PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: acyl-CoA dehydrogenase type 2 domain protein. (386 aa)
Celf_2126TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (412 aa)
Celf_2127PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein. (709 aa)
Celf_2175PFAM: AMP-dependent synthetase and ligase; KEGG: AMP-dependent synthetase and ligase. (601 aa)
Celf_2554KEGG: hypothetical protein. (64 aa)
Celf_2555PFAM: HpcH/HpaI aldolase; KEGG: krh:KRH_22730 putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. (269 aa)
Celf_2556PFAM: MaoC domain protein dehydratase; KEGG: ach:Achl_1408 MaoC domain protein dehydratase. (158 aa)
Celf_2557PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bcv:Bcav_3850 acyl-CoA dehydrogenase domain protein. (391 aa)
Celf_2558PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: rha:RHA1_ro06096 acetyl-CoA carboxylase biotin carboxylase subunit. (717 aa)
Celf_2559KEGG: art:Arth_1385 propionyl-CoA carboxylase; PFAM: carboxyl transferase. (535 aa)
Celf_2560PFAM: regulatory protein TetR; KEGG: ach:Achl_1402 transcriptional regulator, TetR family. (239 aa)
Celf_2564TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: nca:Noca_0330 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase. (259 aa)
Celf_2565TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: cai:Caci_7913 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase. (220 aa)
Celf_2566TIGRFAM: acetyl-CoA acetyltransferase; KEGG: art:Arth_2986 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
Celf_2584PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ach:Achl_3742 acyl-CoA dehydrogenase domain protein. (632 aa)
Celf_2628KEGG: enoyl-CoA hydratase; PFAM: MaoC domain protein dehydratase. (155 aa)
Celf_2629TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (407 aa)
Celf_2630KEGG: cmi:CMM_1026 putative glutaryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein. (398 aa)
Celf_2631Hypothetical protein; KEGG: rer:RER_32400 TetR family transcriptional regulator. (249 aa)
Celf_2632PFAM: thioesterase superfamily protein; KEGG: ami:Amir_5015 thioesterase superfamily protein. (135 aa)
Celf_2633PFAM: aminoglycoside phosphotransferase; KEGG: ami:Amir_3460 aminoglycoside phosphotransferase. (353 aa)
Celf_2634PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: acyl-CoA dehydrogenase domain protein. (416 aa)
Celf_2635PFAM: AMP-dependent synthetase and ligase; KEGG: cmi:CMM_2418 putative long-chain-fatty-acid-CoA ligase. (529 aa)
Celf_2644PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cai:Caci_5243 alcohol dehydrogenase zinc-binding domain protein. (336 aa)
Celf_2645PFAM: regulatory protein TetR; KEGG: sma:SAV_6613 TetR family transcriptional regulator. (196 aa)
Celf_2646PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_5392 3-ketoacyl-(acyl-carrier-protein) reductase. (252 aa)
Celf_2757PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: electron transfer flavoprotein alpha subunit. (332 aa)
Celf_2758KEGG: electron transfer flavoprotein alpha/beta-subunit; manually curated; PFAM: Electron transfer flavoprotein alpha/beta-subunit. (265 aa)
Celf_2832PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (916 aa)
Celf_2839KEGG: biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein. (308 aa)
Celf_2840PFAM: carboxyl transferase; KEGG: carboxyl transferase. (537 aa)
Celf_2841KEGG: hypothetical protein. (177 aa)
Celf_2842KEGG: xce:Xcel_1019 hypothetical protein. (73 aa)
Celf_2843PFAM: protein of unknown function DUF885; KEGG: xce:Xcel_1015 protein of unknown function DUF885. (574 aa)
Celf_2846PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: carbamoyl-phosphate synthase L chain ATP-binding protein. (604 aa)
Celf_2960PFAM: AMP-dependent synthetase and ligase; KEGG: AMP-dependent synthetase and ligase. (561 aa)
Celf_3001TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ach:Achl_2699 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
Celf_3004TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: cai:Caci_7913 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase. (224 aa)
Celf_3005TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: msm:MSMEG_1898 succinyl-CoA:3-ketoacid-coenzyme A transferase 1, precursor; PFAM: coenzyme A transferase. (259 aa)
Celf_3192PFAM: acyl-CoA dehydrogenase domain-containing protein; acyl-CoA oxidase domain-containing protein; KEGG: acyl-CoA dehydrogenase domain protein. (694 aa)
Celf_3194TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (445 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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