STRINGSTRING
Celf_0595 Celf_0595 Celf_0860 Celf_0860 Celf_0861 Celf_0861 Celf_1490 Celf_1490 Celf_1637 Celf_1637 Celf_1712 Celf_1712 Celf_1713 Celf_1713 Celf_1716 Celf_1716 Celf_1775 Celf_1775 Celf_1776 Celf_1776 Celf_2154 Celf_2154 Celf_2155 Celf_2155 Celf_2156 Celf_2156 Celf_2167 Celf_2167 Celf_2168 Celf_2168 Celf_2450 Celf_2450 dtd dtd Celf_3374 Celf_3374 Celf_3375 Celf_3375 Celf_3376 Celf_3376 Celf_3377 Celf_3377 Celf_3378 Celf_3378 Celf_3379 Celf_3379 Celf_3380 Celf_3380 Celf_3671 Celf_3671 Celf_3672 Celf_3672
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0595KEGG: putative lipoprotein. (192 aa)
Celf_0860PFAM: Endonuclease/exonuclease/phosphatase; KEGG: endonuclease/exonuclease/phosphatase. (220 aa)
Celf_0861PFAM: methyltransferase small; KEGG: methyltransferase small; Belongs to the methyltransferase superfamily. (512 aa)
Celf_1490KEGG: hypothetical protein. (133 aa)
Celf_1637KEGG: hypothetical protein. (248 aa)
Celf_1712KEGG: hypothetical protein. (80 aa)
Celf_1713Manually curated; KEGG: hypothetical protein. (119 aa)
Celf_1716PFAM: Phosphoglycerate mutase; KEGG: putative phosphohistidine phosphatase, SixA. (177 aa)
Celf_1775KEGG: hypothetical protein. (83 aa)
Celf_1776KEGG: hypothetical protein. (104 aa)
Celf_2154PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: type I phosphodiesterase/nucleotide pyrophosphatase. (395 aa)
Celf_2155KEGG: hypothetical protein. (194 aa)
Celf_2156PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: GCN5-related N-acetyltransferase. (914 aa)
Celf_2167KEGG: hypothetical protein. (137 aa)
Celf_2168KEGG: lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (389 aa)
Celf_2450KEGG: hypothetical protein. (172 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (140 aa)
Celf_3374PFAM: L-asparaginase II; KEGG: L-asparaginase II. (325 aa)
Celf_3375PFAM: Protein of unknown function DUF2516; KEGG: protein of unknown function DUF2516. (111 aa)
Celf_3376KEGG: membrane protein-like protein. (375 aa)
Celf_3377KEGG: folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family. (399 aa)
Celf_3378Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands. (211 aa)
Celf_3379KEGG: jde:Jden_0442 hypothetical protein. (35 aa)
Celf_3380KEGG: tcu:Tcur_0651 hypothetical protein. (123 aa)
Celf_3671KEGG: protein of unknown function DUF125 transmembrane; manually curated; PFAM: protein of unknown function DUF125 transmembrane. (390 aa)
Celf_3672PFAM: ATP-binding region ATPase domain protein; KEGG: bcv:Bcav_4034 putative anti-sigma regulatory factor, serine/threonine protein kinase. (139 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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