STRINGSTRING
hemL hemL Celf_0236 Celf_0236 hemC hemC Celf_0239 Celf_0239 hemE hemE hemA hemA Celf_0910 Celf_0910 Celf_0911 Celf_0911 Celf_0912 Celf_0912 Celf_0913 Celf_0913 Celf_0914 Celf_0914 Celf_0915 Celf_0915 Celf_0916 Celf_0916 hemH hemH Celf_1281 Celf_1281
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hemLKEGG: glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III. (452 aa)
Celf_0236KEGG: porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (332 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (326 aa)
Celf_0239TIGRFAM: protoporphyrinogen oxidase; KEGG: protoporphyrinogen oxidase; PFAM: amine oxidase. (512 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (354 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (434 aa)
Celf_0910PFAM: YceI family protein; KEGG: YceI family protein; Belongs to the UPF0312 family. (186 aa)
Celf_0911KEGG: transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (185 aa)
Celf_0912PFAM: Phosphoglycerate mutase; KEGG: phosphoglycerate mutase. (223 aa)
Celf_0913PFAM: Redoxin domain protein; KEGG: redoxin domain protein. (204 aa)
Celf_0914PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cytochrome c biogenesis protein transmembrane region. (310 aa)
Celf_0915KEGG: ResB family protein. (616 aa)
Celf_0916KEGG: cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein. (346 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (415 aa)
Celf_1281PFAM: Chlorite dismutase; KEGG: chlorite dismutase. (233 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.