STRINGSTRING
Celf_1690 Celf_1690 Celf_1691 Celf_1691 Celf_1692 Celf_1692 Celf_1693 Celf_1693 Celf_1694 Celf_1694 Celf_1696 Celf_1696 Celf_1697 Celf_1697 Celf_1698 Celf_1698 Celf_1699 Celf_1699 Celf_3203 Celf_3203
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_1690PFAM: ABC-2 type transporter; KEGG: ABC-type multidrug transport system, permease component. (273 aa)
Celf_1691KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (307 aa)
Celf_1692KEGG: putative transcriptional regulator. (245 aa)
Celf_1693KEGG: FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein. (480 aa)
Celf_1694KEGG: FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein. (433 aa)
Celf_1696TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: FeS assembly ATPase SufC; SMART: AAA ATPase. (252 aa)
Celf_1697Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (450 aa)
Celf_1698KEGG: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein. (160 aa)
Celf_1699PFAM: protein of unknown function DUF59; KEGG: protein of unknown function DUF59. (111 aa)
Celf_3203KEGG: cysteine desulfurase; PFAM: aminotransferase class V. (471 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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