(10 nodes) Mixed, incl. ATPase, AAA-3, and Domain of unknown function DUF58 network (Cellulomonas fimi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	Celf_2471	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein. (557 aa)
	Celf_2472	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein. (590 aa)
	Celf_2473	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. (227 aa)
	Celf_2474	KEGG: hypothetical protein. (388 aa)
	Celf_2475	KEGG: hypothetical protein. (227 aa)
	Celf_2476	KEGG: hypothetical protein. (397 aa)
	Celf_2477	PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ATPase associated with various cellular activities AAA_3. (338 aa)
	Celf_2478	PFAM: protein of unknown function DUF58; KEGG: protein of unknown function DUF58. (430 aa)
	Celf_2480	PFAM: protein of unknown function DUF95 transmembrane; KEGG: protein of unknown function DUF95 transmembrane. (329 aa)
	Celf_2481	PFAM: RDD domain containing protein; KEGG: RDD domain containing protein. (276 aa)

Your Current Organism:

Cellulomonas fimi

NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Celf_2471	Celf_2472	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	0.983
Celf_2471	Celf_2473	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	0.782
Celf_2471	Celf_2474	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	KEGG: hypothetical protein.	0.718
Celf_2471	Celf_2475	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	KEGG: hypothetical protein.	0.694
Celf_2471	Celf_2476	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	KEGG: hypothetical protein.	0.711
Celf_2471	Celf_2478	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	PFAM: protein of unknown function DUF58; KEGG: protein of unknown function DUF58.	0.541
Celf_2472	Celf_2471	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	0.983
Celf_2472	Celf_2473	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	0.996
Celf_2472	Celf_2474	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	KEGG: hypothetical protein.	0.717
Celf_2472	Celf_2475	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	KEGG: hypothetical protein.	0.636
Celf_2472	Celf_2476	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	KEGG: hypothetical protein.	0.644
Celf_2472	Celf_2478	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	PFAM: protein of unknown function DUF58; KEGG: protein of unknown function DUF58.	0.513
Celf_2473	Celf_2471	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	0.782
Celf_2473	Celf_2472	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	0.996
Celf_2473	Celf_2474	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	KEGG: hypothetical protein.	0.505
Celf_2473	Celf_2475	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	KEGG: hypothetical protein.	0.506
Celf_2473	Celf_2476	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	KEGG: hypothetical protein.	0.506
Celf_2474	Celf_2471	KEGG: hypothetical protein.	PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: lipoprotein LpqB, beta-propeller domain-like protein.	0.718
Celf_2474	Celf_2472	KEGG: hypothetical protein.	KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.	0.717
Celf_2474	Celf_2473	KEGG: hypothetical protein.	KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.	0.505

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