STRINGSTRING
Celf_0063 Celf_0063 Celf_0064 Celf_0064 Celf_0065 Celf_0065 Celf_0066 Celf_0066 Celf_0067 Celf_0067 Celf_0068 Celf_0068 Celf_0069 Celf_0069 hutI hutI Celf_0071 Celf_0071 Celf_0072 Celf_0072 hutU hutU Celf_0074 Celf_0074 Celf_0075 Celf_0075 Celf_0721 Celf_0721 Celf_0722 Celf_0722 Celf_0723 Celf_0723 Celf_0724 Celf_0724 Celf_0725 Celf_0725 Celf_0726 Celf_0726 Celf_0727 Celf_0727 Celf_0728 Celf_0728 Celf_0730 Celf_0730 Celf_0734 Celf_0734 Celf_1062 Celf_1062 Celf_1149 Celf_1149 Celf_1150 Celf_1150 Celf_1151 Celf_1151 Celf_1152 Celf_1152 Celf_1153 Celf_1153 Celf_1154 Celf_1154 Celf_1155 Celf_1155 Celf_1156 Celf_1156 Celf_1247 Celf_1247 Celf_1282 Celf_1282 Celf_2483 Celf_2483 Celf_2484 Celf_2484 Celf_2485 Celf_2485 Celf_2486 Celf_2486 Celf_2487 Celf_2487 Celf_2488 Celf_2488 Celf_2493 Celf_2493 Celf_2494 Celf_2494 Celf_2495 Celf_2495 Celf_2496 Celf_2496 Celf_2497 Celf_2497 Celf_2498 Celf_2498 Celf_2499 Celf_2499 Celf_2500 Celf_2500 Celf_2501 Celf_2501 Celf_2502 Celf_2502 Celf_2503 Celf_2503 Celf_2505 Celf_2505 Celf_2506 Celf_2506 Celf_2507 Celf_2507 Celf_2508 Celf_2508 Celf_2509 Celf_2509 Celf_2510 Celf_2510 Celf_2511 Celf_2511 Celf_2514 Celf_2514 Celf_2515 Celf_2515 Celf_2516 Celf_2516 Celf_2517 Celf_2517 Celf_2518 Celf_2518 Celf_2525 Celf_2525 Celf_2600 Celf_2600 Celf_2854 Celf_2854 Celf_2867 Celf_2867 Celf_3032 Celf_3032 Celf_3033 Celf_3033 Celf_3034 Celf_3034 Celf_3035 Celf_3035 Celf_3036 Celf_3036 Celf_3037 Celf_3037 Celf_3038 Celf_3038 Celf_3039 Celf_3039 Celf_3040 Celf_3040 Celf_3041 Celf_3041 Celf_3042 Celf_3042 Celf_3043 Celf_3043 Celf_3044 Celf_3044 Celf_3045 Celf_3045 Celf_3046 Celf_3046 Celf_3047 Celf_3047 Celf_3048 Celf_3048 Celf_3108 Celf_3108 Celf_3172 Celf_3172 Celf_3611 Celf_3611
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0063PFAM: Endoribonuclease L-PSP; KEGG: gym:GYMC10_4005 endoribonuclease L-PSP. (161 aa)
Celf_0064PFAM: major facilitator superfamily MFS_1; KEGG: nml:Namu_0688 major facilitator superfamily MFS_1. (403 aa)
Celf_0065PFAM: polysaccharide deacetylase; KEGG: met:M446_6088 polysaccharide deacetylase. (288 aa)
Celf_0066KEGG: bgr:Bgr_16250 hypothetical protein. (553 aa)
Celf_0067PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_3100 glycosyl transferase family protein. (273 aa)
Celf_0068PFAM: FAD dependent oxidoreductase; KEGG: ure:UREG_05579 hypothetical protein. (471 aa)
Celf_0069PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL2590 hypothetical protein. (293 aa)
hutITIGRFAM: imidazolonepropionase; KEGG: bcv:Bcav_1839 imidazolonepropionase; PFAM: amidohydrolase. (388 aa)
Celf_0071KEGG: nml:Namu_0039 formiminoglutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase. (445 aa)
Celf_0072TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: sro:Sros_1779 allantoate amidohydrolase; PFAM: peptidase M20. (409 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (554 aa)
Celf_0074TIGRFAM: histidine ammonia-lyase; KEGG: bcv:Bcav_1837 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase. (543 aa)
Celf_0075KEGG: bcv:Bcav_1836 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR. (260 aa)
Celf_0721TIGRFAM: capsular exopolysaccharide family; KEGG: xce:Xcel_2854 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (521 aa)
Celf_0722TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: xce:Xcel_2926 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (496 aa)
Celf_0723KEGG: xal:XALc_2689 hypothetical protein. (396 aa)
Celf_0724Hypothetical protein; KEGG: mtp:Mthe_0963 putative transmembrane protein. (446 aa)
Celf_0725PFAM: polysaccharide biosynthesis protein; KEGG: pen:PSEEN1497 polysaccharide biosynthesis protein involved O-antigen biosynthesis protein. (433 aa)
Celf_0726PFAM: glycosyl transferase family 2; KEGG: ach:Achl_2418 glycosyl transferase family 2. (312 aa)
Celf_0727PFAM: glycosyl transferase family 2; KEGG: gvi:glr3790 glucosyltransferase. (281 aa)
Celf_0728KEGG: bfs:BF3461 hypothetical protein. (400 aa)
Celf_0730TIGRFAM: nucleotide sugar dehydrogenase; KEGG: kra:Krad_3900 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase. (441 aa)
Celf_0734KEGG: hypothetical protein. (605 aa)
Celf_1062PKD domain containing protein; KEGG: bcv:Bcav_1014 metallophosphoesterase; PFAM: PKD domain containing protein; metallophosphoesterase; SMART: PKD domain containing protein. (879 aa)
Celf_1149KEGG: xce:Xcel_3159 hypothetical protein. (308 aa)
Celf_1150KEGG: galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; Belongs to the GHMP kinase family. GalK subfamily. (408 aa)
Celf_1151TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein. (395 aa)
Celf_1152KEGG: transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. (284 aa)
Celf_1153ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (383 aa)
Celf_1154PFAM: protein of unknown function DUF1003; KEGG: protein of unknown function DUF1003. (192 aa)
Celf_1155PFAM: MgtE intracellular region; CBS domain containing protein; KEGG: MgtE intracellular region. (437 aa)
Celf_1156KEGG: hypothetical protein. (210 aa)
Celf_1247PFAM: NAD-dependent epimerase/dehydratase; KEGG: nucleoside-diphosphate-sugar epimerase. (351 aa)
Celf_1282PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: protein of unknown function DUF306 MetA and HslJ. (119 aa)
Celf_2483KEGG: hypothetical protein. (67 aa)
Celf_2484PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: jde:Jden_1856 phosphomannomutase. (490 aa)
Celf_2485KEGG: hypothetical protein. (91 aa)
Celf_2486Manually curated; KEGG: hypothetical protein. (123 aa)
Celf_2487PFAM: protein of unknown function DUF1025; KEGG: protein of unknown function DUF1025. (121 aa)
Celf_2488PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2. (284 aa)
Celf_2493Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (291 aa)
Celf_2494KEGG: gob:Gobs_4293 hypothetical protein. (784 aa)
Celf_2495PFAM: GtrA family protein; KEGG: ami:Amir_0124 GtrA family protein. (158 aa)
Celf_2496PFAM: glycosyl transferase family 2; KEGG: rer:RER_02520 glycosyltransferase. (343 aa)
Celf_2497PFAM: NAD-dependent epimerase/dehydratase; KEGG: rer:RER_02510 NAD-dependent epimerase/dehydratase family protein. (310 aa)
Celf_2498KEGG: hypothetical protein. (177 aa)
Celf_2499KEGG: LGFP repeat protein. (802 aa)
Celf_2500PFAM: glycosyl transferase family 2; KEGG: predicted glycosyltransferase. (342 aa)
Celf_2501KEGG: polysaccharide biosynthesis protein. (424 aa)
Celf_2502PFAM: glycosyl transferase family 2; KEGG: xce:Xcel_2568 glycosyl transferase family 2. (245 aa)
Celf_2503KEGG: xce:Xcel_2569 hypothetical protein. (146 aa)
Celf_2505dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (282 aa)
Celf_2506TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related. (206 aa)
Celf_2507PFAM: glycosyl transferase family 2; KEGG: rhamnosyltransferase. (317 aa)
Celf_2508KEGG: cwo:Cwoe_5488 hypothetical protein. (691 aa)
Celf_2509PFAM: glycosyl transferase group 1; KEGG: npu:Npun_F4534 methyltransferase type 11. (827 aa)
Celf_2510KEGG: tbr:Tb927.6.1180 hypothetical protein. (125 aa)
Celf_2511PFAM: glycosyl transferase family 2; KEGG: mea:Mex_1p0611 putative glycosyl transferase. (501 aa)
Celf_2514KEGG: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (331 aa)
Celf_2515PFAM: Methyltransferase type 11; KEGG: sus:Acid_7436 methyltransferase type 11. (305 aa)
Celf_2516PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase family 2. (461 aa)
Celf_2517KEGG: nml:Namu_4204 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (403 aa)
Celf_2518PFAM: ABC-2 type transporter; KEGG: nml:Namu_4205 ABC-2 type transporter. (277 aa)
Celf_2525TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I. (398 aa)
Celf_2600PFAM: NAD-dependent epimerase/dehydratase; KEGG: kfl:Kfla_0679 NAD-dependent epimerase/dehydratase. (333 aa)
Celf_2854PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: glucose-1,6-bisphosphate synthase. (615 aa)
Celf_2867KEGG: mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II. (388 aa)
Celf_3032TIGRFAM: capsular exopolysaccharide family; KEGG: bcv:Bcav_1003 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (543 aa)
Celf_3033KEGG: bcv:Bcav_1002 hypothetical protein. (448 aa)
Celf_3034PFAM: glycosyl transferase group 1; KEGG: xac:XAC2578 GumI protein. (379 aa)
Celf_3035PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_0751 glycosyl transferase group 1. (354 aa)
Celf_3036PFAM: polysaccharide biosynthesis protein; KEGG: rop:ROP_55110 hypothetical membrane protein. (449 aa)
Celf_3037PFAM: glycosyl transferase family 2; KEGG: nml:Namu_4453 glycosyl transferase family 2. (360 aa)
Celf_3038KEGG: nml:Namu_4457 PKD domain containing protein; PFAM: PKD domain containing protein; Laminin G sub domain 2; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; PKD domain containing protein; LamG domain protein jellyroll fold domain protein. (1569 aa)
Celf_3039KEGG: bcv:Bcav_0997 PKD domain containing protein; PFAM: PKD domain containing protein; Laminin G sub domain 2; Fibronectin type III domain protein; SMART: PKD domain containing protein; LamG domain protein jellyroll fold domain protein; Fibronectin type III domain protein. (1176 aa)
Celf_3040KEGG: hypothetical protein. (229 aa)
Celf_3041PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cms:CMS_0082 putative glycosyl transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (265 aa)
Celf_3042PFAM: protein of unknown function DUF1972; glycosyl transferase group 1; KEGG: protein of unknown function DUF1972. (416 aa)
Celf_3043TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (512 aa)
Celf_3044PFAM: glycosyl transferase group 1; KEGG: nml:Namu_4455 glycosyl transferase group 1. (369 aa)
Celf_3045KEGG: nml:Namu_4452 glycosyl transferase family 2. (310 aa)
Celf_3046PFAM: glycosyl transferase group 1; KEGG: mrd:Mrad2831_5473 glycosyl transferase group 1. (369 aa)
Celf_3047Hypothetical protein; KEGG: bcv:Bcav_1000 parallel beta-helix repeat protein. (541 aa)
Celf_3048KEGG: bcv:Bcav_1000 parallel beta-helix repeat protein. (732 aa)
Celf_3108KEGG: hypothetical protein. (251 aa)
Celf_3172KEGG: bcv:Bcav_3495 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase. (319 aa)
Celf_3611TIGRFAM: nucleotide sugar dehydrogenase; KEGG: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase. (465 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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