STRINGSTRING
Celf_0371 Celf_0371 Celf_0462 Celf_0462 Celf_2375 Celf_2375 Celf_2376 Celf_2376 Celf_2377 Celf_2377 Celf_2379 Celf_2379
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0371PFAM: protein of unknown function DUF179; KEGG: sco:SCO2948 hypothetical protein; Belongs to the UPF0301 (AlgH) family. (200 aa)
Celf_0462PFAM: Carbohydrate kinase, FGGY-like; KEGG: kfl:Kfla_0657 carbohydrate kinase FGGY. (487 aa)
Celf_2375PFAM: major facilitator superfamily MFS_1; KEGG: arabinose efflux permease family protein. (424 aa)
Celf_2376KEGG: iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor. (229 aa)
Celf_2377KEGG: curculin domain protein (mannose-binding) lectin; PFAM: Curculin domain protein (mannose-binding) lectin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; SMART: Curculin domain protein (mannose-binding) lectin. (526 aa)
Celf_2379KEGG: bcv:Bcav_1716 hypothetical protein. (176 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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