STRINGSTRING
Celf_0316 Celf_0316 Celf_0438 Celf_0438 Celf_0526 Celf_0526 Celf_0885 Celf_0885 Celf_0886 Celf_0886 Celf_2647 Celf_2647 Celf_2769 Celf_2769 Celf_2785 Celf_2785 Celf_3271 Celf_3271 Celf_3313 Celf_3313 Celf_3551 Celf_3551 Celf_3623 Celf_3623 Celf_3624 Celf_3624 Celf_3626 Celf_3626 Celf_3628 Celf_3628
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0316PFAM: Aldose 1-epimerase; KEGG: aldose 1-epimerase. (333 aa)
Celf_0438KEGG: ricin B lectin; PFAM: Ricin B lectin; glycoside hydrolase clan GH-D; SMART: Ricin B lectin. (561 aa)
Celf_0526Beta-galactosidase; KEGG: bcv:Bcav_3076 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (681 aa)
Celf_0885Beta-galactosidase; KEGG: scb:SCAB_7361 putative beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein. (758 aa)
Celf_0886Beta-galactosidase; KEGG: bcv:Bcav_3298 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (686 aa)
Celf_2647PFAM: Aldose 1-epimerase; KEGG: aldose 1-epimerase. (311 aa)
Celf_2769Alpha-galactosidase; KEGG: glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D. (728 aa)
Celf_2785Beta-galactosidase; KEGG: xce:Xcel_1193 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (672 aa)
Celf_3271KEGG: beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (698 aa)
Celf_3313Beta-galactosidase; KEGG: bcv:Bcav_3298 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein. (669 aa)
Celf_3551PFAM: glycoside hydrolase family 35; KEGG: ach:Achl_3250 beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (793 aa)
Celf_3623KEGG: kra:Krad_3464 putative alpha-galactosidase. (445 aa)
Celf_3624KEGG: beta-galactosidase; PFAM: glycoside hydrolase family 35. (583 aa)
Celf_3626KEGG: bcv:Bcav_3379 glycoside hydrolase family 2 TIM barrel; manually curated; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region. (1028 aa)
Celf_3628PFAM: glycoside hydrolase family 35; KEGG: beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (881 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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