STRINGSTRING
Celf_1077 Celf_1077 Celf_1078 Celf_1078 Celf_1079 Celf_1079 Celf_1080 Celf_1080 Celf_3164 Celf_3164
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_1077KEGG: kra:Krad_1535 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. (253 aa)
Celf_1078TIGRFAM: 1-phosphofructokinase; KEGG: jde:Jden_0064 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. (315 aa)
Celf_1079Putative PTS IIA-like nitrogen-regulatory protein PtsN; KEGG: PTS system, fructose subfamily, IIA component; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2. (151 aa)
Celf_1080KEGG: PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC. (506 aa)
Celf_3164PFAM: PfkB domain protein; KEGG: bcv:Bcav_3493 PfkB domain protein. (324 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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