STRINGSTRING
Celf_0857 Celf_0857 Celf_0858 Celf_0858 Celf_2980 Celf_2980 Celf_2990 Celf_2990 Celf_3011 Celf_3011 Celf_3012 Celf_3012 Celf_3013 Celf_3013 Celf_3267 Celf_3267 Celf_3287 Celf_3287 Celf_3290 Celf_3290 Celf_3291 Celf_3291 Celf_3292 Celf_3292 Celf_3293 Celf_3293 Celf_3294 Celf_3294 Celf_3295 Celf_3295 Celf_3296 Celf_3296 Celf_3304 Celf_3304 Celf_3306 Celf_3306 Celf_3307 Celf_3307 Celf_3308 Celf_3308 Celf_3309 Celf_3309 Celf_3310 Celf_3310 Celf_3311 Celf_3311 Celf_3312 Celf_3312 Celf_3318 Celf_3318 Celf_3319 Celf_3319 Celf_3320 Celf_3320 Celf_3321 Celf_3321 Celf_3331 Celf_3331 Celf_3332 Celf_3332 Celf_3333 Celf_3333 Celf_3344 Celf_3344 Celf_3345 Celf_3345 kduI kduI Celf_3347 Celf_3347 Celf_3348 Celf_3348 Celf_3349 Celf_3349
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0857PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: cai:Caci_3810 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding. (338 aa)
Celf_0858PFAM: Uncharacterised conserved protein UCP014753; KEGG: cai:Caci_3809 hypothetical protein. (683 aa)
Celf_2980PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bfa:Bfae_28340 alpha-L-rhamnosidase. (879 aa)
Celf_2990KEGG: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR. (684 aa)
Celf_3011KEGG: ach:Achl_3107 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel. (389 aa)
Celf_3012PFAM: Carbohydrate kinase, FGGY-like; KEGG: carbohydrate kinase, FGGY. (496 aa)
Celf_3013KEGG: rrs:RoseRS_1581 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein. (275 aa)
Celf_3267PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mandelate racemase/muconate lactonizing protein. (470 aa)
Celf_3287KEGG: altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein. (555 aa)
Celf_3290PFAM: PfkB domain protein; KEGG: PfkB domain protein. (367 aa)
Celf_3291KEGG: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase. (211 aa)
Celf_3292KEGG: glucuronate isomerase; PFAM: Glucuronate isomerase. (492 aa)
Celf_3293KEGG: transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI. (448 aa)
Celf_3294PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mannitol dehydrogenase domain protein. (499 aa)
Celf_3295PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: predicted dehydrogenase. (387 aa)
Celf_3296PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: xce:Xcel_0895 xylose isomerase domain protein TIM barrel. (335 aa)
Celf_3304KEGG: nml:Namu_3214 hypothetical protein. (90 aa)
Celf_3306PFAM: Carbohydrate kinase, FGGY-like; KEGG: pentulose/hexulose kinase. (509 aa)
Celf_3307KEGG: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR. (688 aa)
Celf_3308KEGG: L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel. (392 aa)
Celf_3309PFAM: protein of unknown function DUF718; KEGG: hypothetical protein. (175 aa)
Celf_3310KEGG: transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI. (349 aa)
Celf_3311PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: predicted dehydrogenase. (382 aa)
Celf_3312Hypothetical protein; KEGG: mrb:Mrub_1064 PEGA domain-containing protein. (41 aa)
Celf_3318PFAM: Cupin 2 conserved barrel domain protein; KEGG: cupin 2 conserved barrel domain protein. (242 aa)
Celf_3319KEGG: hypothetical protein. (367 aa)
Celf_3320PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: xce:Xcel_2657 oxidoreductase domain protein. (495 aa)
Celf_3321KEGG: alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein. (506 aa)
Celf_3331KEGG: hypothetical protein. (309 aa)
Celf_3332PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: predicted dehydrogenase. (382 aa)
Celf_3333Transcriptional regulator, LacI family; KEGG: bfa:Bfae_29250 transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. (655 aa)
Celf_3344PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cai:Caci_4949 short-chain dehydrogenase/reductase SDR. (263 aa)
Celf_3345KEGG: kra:Krad_0198 transcriptional regulator IclR; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR. (278 aa)
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (279 aa)
Celf_3347KEGG: kra:Krad_0196 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (435 aa)
Celf_3348PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: kra:Krad_0195 tripartite ATP-independent periplasmic transporter DctQ component. (212 aa)
Celf_3349KEGG: kra:Krad_0194 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7. (347 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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