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Celf_1476 Celf_1476 gyrB gyrB gyrA gyrA Celf_0053 Celf_0053 Celf_0085 Celf_0085 Celf_0108 Celf_0108 Celf_0126 Celf_0126 Celf_0145 Celf_0145 Celf_0182 Celf_0182 Celf_0227 Celf_0227 Celf_0288 Celf_0288 Celf_0321 Celf_0321 Celf_0336 Celf_0336 Celf_0442 Celf_0442 dnaK dnaK Celf_0514 Celf_0514 Celf_0515 Celf_0515 Celf_0528 Celf_0528 ftsH ftsH pstB pstB Celf_0610 Celf_0610 groL groL Celf_0652 Celf_0652 Celf_0653 Celf_0653 Celf_0674 Celf_0674 Celf_0753 Celf_0753 Celf_0797 Celf_0797 Celf_0818 Celf_0818 Celf_0844 Celf_0844 Celf_0883 Celf_0883 Celf_0901 Celf_0901 Celf_0964 Celf_0964 Celf_1036 Celf_1036 groS groS Celf_1094 Celf_1094 Celf_1095 Celf_1095 Celf_1107 Celf_1107 Celf_1108 Celf_1108 Celf_1153 Celf_1153 Celf_1160 Celf_1160 Celf_1165 Celf_1165 Celf_1166 Celf_1166 Celf_1171 Celf_1171 Celf_1179 Celf_1179 Celf_1193 Celf_1193 metN metN Celf_1256 Celf_1256 Celf_1278 Celf_1278 Celf_1289 Celf_1289 Celf_1314 Celf_1314 Celf_1348 Celf_1348 Celf_1369 Celf_1369 Celf_1384 Celf_1384 clpP clpP clpP-2 clpP-2 clpX clpX Celf_1433 Celf_1433 Celf_1435 Celf_1435 Celf_1465 Celf_1465 Celf_1466 Celf_1466 smc smc Celf_1564 Celf_1564 recA recA Celf_1574 Celf_1574 Celf_1584 Celf_1584 Celf_1594 Celf_1594 Celf_1606 Celf_1606 Celf_1699 Celf_1699 Celf_1710 Celf_1710 Celf_1724 Celf_1724 Celf_1725 Celf_1725 arc arc Celf_1798 Celf_1798 Celf_1799 Celf_1799 uvrB uvrB uvrA uvrA Celf_1867 Celf_1867 Celf_1928 Celf_1928 Celf_1950 Celf_1950 priA priA Celf_2015 Celf_2015 secF secF secD secD ruvB ruvB ruvA ruvA Celf_2052 Celf_2052 Celf_2057 Celf_2057 Celf_2096 Celf_2096 Celf_2113 Celf_2113 Celf_2146 Celf_2146 Celf_2157 Celf_2157 Celf_2160 Celf_2160 Celf_2272 Celf_2272 Celf_2281 Celf_2281 Celf_2312 Celf_2312 Celf_2313 Celf_2313 Celf_2338 Celf_2338 Celf_2388 Celf_2388 Celf_2431 Celf_2431 Celf_2432 Celf_2432 Celf_2444 Celf_2444 Celf_2445 Celf_2445 secA secA Celf_2475 Celf_2475 Celf_2476 Celf_2476 Celf_2477 Celf_2477 Celf_2517 Celf_2517 recC recC recB recB recD recD Celf_2685 Celf_2685 Celf_2711 Celf_2711 Celf_2716 Celf_2716 Celf_2728 Celf_2728 Celf_2766 Celf_2766 atpD atpD atpA atpA rho rho ychF ychF Celf_2921 Celf_2921 Celf_2923 Celf_2923 Celf_2978 Celf_2978 mfd mfd Celf_3078 Celf_3078 Celf_3098 Celf_3098 Celf_3135 Celf_3135 Celf_3142 Celf_3142 Celf_3144 Celf_3144 Celf_3251 Celf_3251 Celf_3261 Celf_3261 Celf_3324 Celf_3324 Celf_3334 Celf_3334 Celf_3338 Celf_3338 Celf_3352 Celf_3352 Celf_3413 Celf_3413 Celf_3424 Celf_3424 Celf_3430 Celf_3430 Celf_3444 Celf_3444 Celf_3460 Celf_3460 Celf_3471 Celf_3471 radA radA clpB clpB Celf_3600 Celf_3600 Celf_3609 Celf_3609 Celf_3630 Celf_3630 Celf_3632 Celf_3632 Celf_3709 Celf_3709 Celf_3714 Celf_3714 clpP-3 clpP-3 Celf_3803 Celf_3803
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Celf_1476PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ATPase associated with various cellular activities AAA_3. (531 aa)
gyrBDNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (682 aa)
gyrADNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (870 aa)
Celf_0053Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (459 aa)
Celf_0085PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component. (334 aa)
Celf_0108PFAM: ATP-binding region ATPase domain protein; KEGG: ATP-binding region ATPase domain protein. (615 aa)
Celf_0126PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cmi:CMM_2730 putative sugar ABC transporter, permease component. (318 aa)
Celf_0145TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. (540 aa)
Celf_0182KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase. (686 aa)
Celf_0227KEGG: heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase. (869 aa)
Celf_0288PFAM: ABC transporter related; KEGG: aau:AAur_2199 putative excinuclease ABC, A subunit. (797 aa)
Celf_0321KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (646 aa)
Celf_0336KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (356 aa)
Celf_0442KEGG: bfa:Bfae_07730 P-loop ATPase protein family. (175 aa)
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (620 aa)
Celf_0514KEGG: ATPase involved in chromosome partitioning. (498 aa)
Celf_0515CRISPR-associated HD domain protein; KEGG: sgr:SGR_3542 putative CRISPR-associated helicase Cas3 family protein protein; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; SMART: DEAD-like helicase. (948 aa)
Celf_0528PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein. (321 aa)
ftsHATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (684 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (259 aa)
Celf_0610KEGG: ABC transporter related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (375 aa)
groLChaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (541 aa)
Celf_0652KEGG: helicase domain protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein. (548 aa)
Celf_0653KEGG: hypothetical protein. (896 aa)
Celf_0674TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: type III secretion system ATPase, FliI/YscN; SMART: AAA ATPase. (444 aa)
Celf_0753PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ATPase associated with various cellular activities AAA_5. (369 aa)
Celf_0797PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: blo:BL0424 sugar permease of ABC transporter system. (315 aa)
Celf_0818KEGG: ami:Amir_2777 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (630 aa)
Celf_0844KEGG: protein of unknown function DUF1998; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (870 aa)
Celf_0883PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_7341 putative integral membrane transport protein. (316 aa)
Celf_0901PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0512 binding-protein-dependent transport systems inner membrane component. (323 aa)
Celf_0964KEGG: kfl:Kfla_5001 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)
Celf_1036KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (560 aa)
groSChaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. (98 aa)
Celf_1094KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (577 aa)
Celf_1095PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ABC transporter related protein. (604 aa)
Celf_1107KEGG: ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase. (852 aa)
Celf_1108PFAM: Clp domain protein; KEGG: xce:Xcel_0725 Clp domain protein. (179 aa)
Celf_1153ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (383 aa)
Celf_1160KEGG: DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. (590 aa)
Celf_1165PFAM: UvrD/REP helicase; KEGG: UvrD/REP helicase. (1077 aa)
Celf_1166PFAM: UvrD/REP helicase; KEGG: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1166 aa)
Celf_1171KEGG: UvrD/REP helicase; PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein. (686 aa)
Celf_1179KEGG: PDZ/DHR/GLGF domain protein. (376 aa)
Celf_1193Manually curated; PFAM: ABC transporter related; KEGG: amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase. (247 aa)
metNABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (339 aa)
Celf_1256KEGG: bcv:Bcav_1233 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (371 aa)
Celf_1278PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_4674 binding-protein-dependent transport systems inner membrane component. (317 aa)
Celf_1289PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component. (335 aa)
Celf_1314KEGG: putative ABC transporter integral membrane protein. (307 aa)
Celf_1348PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0235 binding-protein-dependent transport systems inner membrane component. (313 aa)
Celf_1369Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. (126 aa)
Celf_1384KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (560 aa)
clpPEndopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (205 aa)
clpP-2Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (233 aa)
clpXATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (425 aa)
Celf_1433KEGG: ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase. (900 aa)
Celf_1435KEGG: kra:Krad_4421 extracellular solute-binding protein family 3. (332 aa)
Celf_1465KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (593 aa)
Celf_1466KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (606 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1186 aa)
Celf_1564KEGG: DEAD/H associated domain protein; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (1668 aa)
recArecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (346 aa)
Celf_1574KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (262 aa)
Celf_1584SMART: helicase c2; DEAD-like helicase; KEGG: helicase C2. (701 aa)
Celf_1594KEGG: UvrD/REP helicase. (750 aa)
Celf_1606PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ATPase associated with various cellular activities AAA_3. (337 aa)
Celf_1699PFAM: protein of unknown function DUF59; KEGG: protein of unknown function DUF59. (111 aa)
Celf_1710KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (532 aa)
Celf_1724KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (581 aa)
Celf_1725KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (672 aa)
arcKEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase. (545 aa)
Celf_1798KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (620 aa)
Celf_1799KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (613 aa)
uvrBExcinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (701 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (951 aa)
Celf_1867Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (80 aa)
Celf_1928KEGG: DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. (596 aa)
Celf_1950KEGG: DSH domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DSH domain protein; SMART: DEAD-like helicase; helicase domain protein. (937 aa)
priAPrimosomal protein N' (replication factor Y) - superfamily II helicase-like protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (699 aa)
Celf_2015KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase. (458 aa)
secFProtein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (364 aa)
secDProtein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (647 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (355 aa)
ruvAHolliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (204 aa)
Celf_2052KEGG: copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase. (803 aa)
Celf_2057KEGG: sna:Snas_3665 hypothetical protein. (255 aa)
Celf_2096KEGG: rha:RHA1_ro03758 cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase. (946 aa)
Celf_2113PFAM: AFG1-family ATPase; KEGG: AFG1-family ATPase. (358 aa)
Celf_2146PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: nucleic acid binding OB-fold tRNA/helicase-type. (122 aa)
Celf_2157PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A. (824 aa)
Celf_2160PFAM: DNA gyrase subunit B domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; KEGG: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein. (712 aa)
Celf_2272SMART: AAA ATPase; KEGG: msm:MSMEG_5645 hypothetical protein. (246 aa)
Celf_2281PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3013 putative ABC-type sugar transport system, permease component. (307 aa)
Celf_2312PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0746 binding-protein-dependent transport systems inner membrane component. (307 aa)
Celf_2313PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component. (542 aa)
Celf_2338PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ATPase associated with various cellular activities AAA_3. (318 aa)
Celf_2388KEGG: DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (529 aa)
Celf_2431TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase. (550 aa)
Celf_2432TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; SMART: AAA ATPase. (681 aa)
Celf_2444KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (229 aa)
Celf_2445KEGG: DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (750 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (937 aa)
Celf_2475KEGG: hypothetical protein. (227 aa)
Celf_2476KEGG: hypothetical protein. (397 aa)
Celf_2477PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ATPase associated with various cellular activities AAA_3. (338 aa)
Celf_2517KEGG: nml:Namu_4204 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (403 aa)
recCExodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1138 aa)
recBExodeoxyribonuclease V; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzy [...] (1216 aa)
recDExodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (644 aa)
Celf_2685KEGG: DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein. (853 aa)
Celf_2711KEGG: hypothetical protein. (332 aa)
Celf_2716PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein. (308 aa)
Celf_2728PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_2071 binding-protein-dependent transport systems inner membrane component. (348 aa)
Celf_2766PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_1758 binding-protein-dependent transport systems inner membrane component. (324 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (493 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (542 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (724 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (358 aa)
Celf_2921KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (422 aa)
Celf_2923PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1096 binding-protein-dependent transport systems inner membrane component. (322 aa)
Celf_2978PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_84771 putative binding-protein-dependent transport protein. (294 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1222 aa)
Celf_3078KEGG: jde:Jden_1962 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (590 aa)
Celf_3098KEGG: hypothetical protein. (1593 aa)
Celf_3135KEGG: helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein. (720 aa)
Celf_3142Hypothetical protein; Manually curated; KEGG: dol:Dole_3086 hypothetical protein. (1050 aa)
Celf_3144KEGG: kse:Ksed_06440 TrwC relaxase; TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase. (963 aa)
Celf_3251PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_29410 carbohydrate ABC transporter membrane protein. (314 aa)
Celf_3261TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein. (693 aa)
Celf_3324PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein. (318 aa)
Celf_3334PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_2535 binding-protein-dependent transport systems inner membrane component. (314 aa)
Celf_3338KEGG: xce:Xcel_0436 hypothetical protein. (386 aa)
Celf_3352KEGG: ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; Belongs to the ClpA/ClpB family. (860 aa)
Celf_3413KEGG: hypothetical protein. (381 aa)
Celf_3424SMART: AAA ATPase; KEGG: AAA ATPase. (240 aa)
Celf_3430Manually curated; PFAM: type III restriction protein res subunit; helicase domain protein; KEGG: scl:sce3234 putative helicase; SMART: helicase domain protein; DEAD-like helicase. (1029 aa)
Celf_3444Manually curated; KEGG: xce:Xcel_0877 sec-C motif domain protein; Belongs to the UPF0225 family. (146 aa)
Celf_3460KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; Belongs to the AAA ATPase family. (634 aa)
Celf_3471KEGG: scb:SCAB_16151 hypothetical protein. (388 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (475 aa)
clpBATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (866 aa)
Celf_3600PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein. (329 aa)
Celf_3609KEGG: hypothetical protein. (274 aa)
Celf_3630PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: permease component of ABC-type sugar transporter. (324 aa)
Celf_3632KEGG: sco:SCO0700 ABC transporter protein ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (588 aa)
Celf_3709KEGG: putative exonuclease. (1044 aa)
Celf_3714TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: ATP-dependent helicase HrpA; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein. (1526 aa)
clpP-3Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (206 aa)
Celf_3803Hypothetical protein; KEGG: cobyrinic acid ac-diamide synthase. (628 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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