STRINGSTRING
Celf_3261 Celf_3261 Celf_2537 Celf_2537 Celf_3803 Celf_3803 recF recF recR recR Celf_0145 Celf_0145 Celf_0615 Celf_0615 Celf_1677 Celf_1677 Celf_1876 Celf_1876 Celf_3795 Celf_3795 Celf_1938 Celf_1938 recO recO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_3261TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein. (693 aa)
Celf_2537KEGG: rha:RHA1_ro01632 restriction endonuclease; manually curated; PFAM: restriction endonuclease. (281 aa)
Celf_3803Hypothetical protein; KEGG: cobyrinic acid ac-diamide synthase. (628 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (423 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa)
Celf_0145TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. (540 aa)
Celf_0615KEGG: bcv:Bcav_3197 hypothetical protein. (130 aa)
Celf_1677DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (578 aa)
Celf_1876KEGG: cobyrinic acid ac-diamide synthase. (288 aa)
Celf_3795KEGG: hypothetical protein. (754 aa)
Celf_1938KEGG: cobyrinic acid ac-diamide synthase. (258 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (243 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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