STRINGSTRING
Celf_0019 Celf_0019 Celf_0045 Celf_0045 Celf_0293 Celf_0293 Celf_0317 Celf_0317 Celf_0635 Celf_0635 Celf_0787 Celf_0787 Celf_1481 Celf_1481 cenC cenC Celf_1705 Celf_1705 Celf_1856 Celf_1856 Celf_1886 Celf_1886 Celf_2787 Celf_2787 Celf_2980 Celf_2980 cbhB cbhB Celf_3596 Celf_3596 Celf_3688 Celf_3688
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0019KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; cellulose-binding family II; Fibronectin type III domain protein; type 3a cellulose-binding domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein. (1045 aa)
Celf_0045KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein. (912 aa)
Celf_0293PFAM: glycoside hydrolase 15-related; KEGG: nml:Namu_5241 glycoside hydrolase 15-related. (654 aa)
Celf_0317PFAM: glycosyltransferase 36; glycosyltransferase 36 associated; carbohydrate binding; KEGG: glycosyltransferase 36. (822 aa)
Celf_0635PFAM: glycoside hydrolase 15-related; KEGG: glycoside hydrolase 15-related protein. (516 aa)
Celf_0787PFAM: Ig domain protein; KEGG: xac:XAC2534 hypothetical protein. (2070 aa)
Celf_1481PFAM: glycoside hydrolase family 9; KEGG: glycoside hydrolase family 9. (536 aa)
cenCGlycoside hydrolase family 9; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose; Belongs to the glycosyl hydrolase 9 (cellulase E) family. (1101 aa)
Celf_1705PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; KEGG: glycoside hydrolase family 9. (1106 aa)
Celf_1856PFAM: glycoside hydrolase 15-related; KEGG: glycoside hydrolase 15-related protein. (616 aa)
Celf_1886Beta-phosphoglucomutase family hydrolase; KEGG: mdi:METDI0534 putative glycoside hydrolase or sugar phosphorilase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; Haloacid dehalogenase domain protein hydrolase. (1045 aa)
Celf_2787KEGG: alpha-L-fucosidase. (820 aa)
Celf_2980PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bfa:Bfae_28340 alpha-L-rhamnosidase. (879 aa)
cbhBGlycoside hydrolase family 48; Hydrolyzes cellohexaose to a mixture of cellotetraose, cellotriose and cellobiose, with only a trace of glucose. It hydrolyzed cellopentaose to cellotriose and cellobiose, and cellotetraose to cellobiose, but it did not hydrolyze cellotriose. Has also weak endoglucanase activity. Hydrolyzes glucosidic bonds with inversion of anomeric configuration; Belongs to the glycosyl hydrolase 48 (cellulase L) family. (1090 aa)
Celf_3596PFAM: N-acylglucosamine 2-epimerase; KEGG: N-acylglucosamine 2-epimerase. (410 aa)
Celf_3688PFAM: N-acylglucosamine 2-epimerase; KEGG: protein of unknown function DUF255. (737 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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