STRINGSTRING
pat pat Celf_0981 Celf_0981 Celf_1084 Celf_1084 Celf_1548 Celf_1548 hisC hisC Celf_2072 Celf_2072 Celf_2074 Celf_2074 Celf_2076 Celf_2076 Celf_2077 Celf_2077 Celf_2832 Celf_2832 Celf_2994 Celf_2994 Celf_2995 Celf_2995
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
patHistidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (355 aa)
Celf_0981PFAM: aminotransferase class I and II; KEGG: aminotransferase class I and II. (410 aa)
Celf_1084PFAM: Aldehyde Dehydrogenase; MutL dimerisation; KEGG: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (536 aa)
Celf_1548PFAM: Aldehyde Dehydrogenase; KEGG: succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (492 aa)
hisCKEGG: histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (380 aa)
Celf_2072PFAM: fumarylacetoacetate (FAA) hydrolase; Dimethylmenaquinone methyltransferase; KEGG: nfa:nfa27790 hypothetical protein. (499 aa)
Celf_2074PFAM: Aldehyde Dehydrogenase; KEGG: nfa:nfa27770 putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (518 aa)
Celf_2076KEGG: nfa:nfa27750 putative hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase. (261 aa)
Celf_20774-hydroxy-2-oxovalerate aldolase; KEGG: nfa:nfa27740 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (274 aa)
Celf_2832PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (916 aa)
Celf_2994KEGG: mycothiol-dependent maleylpyruvate isomerase. (175 aa)
Celf_2995PFAM: Cupin 2 conserved barrel domain protein; KEGG: cupin 2 conserved barrel domain protein. (358 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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