STRINGSTRING
Celf_0660 Celf_0660 Celf_0661 Celf_0661 Celf_0663 Celf_0663 Celf_0664 Celf_0664 Celf_0665 Celf_0665 Celf_0666 Celf_0666 Celf_0668 Celf_0668 Celf_0669 Celf_0669 fliE fliE Celf_0671 Celf_0671 Celf_0672 Celf_0672 Celf_0673 Celf_0673 Celf_0674 Celf_0674 Celf_0675 Celf_0675 Celf_0677 Celf_0677 Celf_0678 Celf_0678 Celf_0679 Celf_0679 Celf_0684 Celf_0684 Celf_0685 Celf_0685 Celf_0687 Celf_0687 Celf_0688 Celf_0688 Celf_0689 Celf_0689 fliP fliP fliQ fliQ Celf_0692 Celf_0692 Celf_0693 Celf_0693 flhA flhA Celf_1512 Celf_1512
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Celf_0660KEGG: jde:Jden_2042 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein. (303 aa)
Celf_0661KEGG: flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (480 aa)
Celf_0663KEGG: RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein. (296 aa)
Celf_0664Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (391 aa)
Celf_0665Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (446 aa)
Celf_0666PFAM: flagellar protein FliS; KEGG: flagellar biosynthetic protein FliS. (148 aa)
Celf_0668Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (115 aa)
Celf_0669KEGG: jde:Jden_2029 flagellar basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein. (132 aa)
fliEKEGG: flagellar hook-basal body protein; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. (102 aa)
Celf_0671Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (535 aa)
Celf_0672KEGG: flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG. (333 aa)
Celf_0673KEGG: hypothetical protein. (280 aa)
Celf_0674TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: type III secretion system ATPase, FliI/YscN; SMART: AAA ATPase. (444 aa)
Celf_0675PFAM: flagellar export FliJ family protein; KEGG: jde:Jden_2023 flagellar FliJ protein. (141 aa)
Celf_0677KEGG: hypothetical protein. (476 aa)
Celf_0678PFAM: flagellar hook capping protein; KEGG: flagellar hook capping protein. (151 aa)
Celf_0679KEGG: flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein. (392 aa)
Celf_0684PFAM: MotA/TolQ/ExbB proton channel; KEGG: flagellar motor component. (261 aa)
Celf_0685PFAM: OmpA/MotB domain protein; KEGG: flagellar motor protein. (301 aa)
Celf_0687PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: flagellar motor switch protein. (309 aa)
Celf_0688KEGG: flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein. (238 aa)
Celf_0689KEGG: flagellar biogenesis protein. (163 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (240 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (90 aa)
Celf_0692KEGG: flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein. (255 aa)
Celf_0693PFAM: type III secretion exporter; KEGG: flagellar biosynthesis pathway, component FlhB. (400 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (685 aa)
Celf_1512RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (296 aa)
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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