(15 nodes) Inorganic cation transmembrane transporter activity network (Staphylothermus hellenicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atpB	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (469 aa)
	ADI31283.1	KEGG: ara:Arad_1474 Na+/H+ antiporter; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit. (127 aa)
	ADI31920.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: gur:Gura_3419 magnesium and cobalt transport protein CorA. (272 aa)
	ADI31936.1	Small GTP-binding protein; KEGG: sat:SYN_02208 Fe2+ transport system protein B; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein. (696 aa)
	ADI32047.1	TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit. (159 aa)
	ADI32258.1	Hypothetical protein; KEGG: sun:SUN_1293 Mn transporter. (381 aa)
	ADI32335.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: noc:Noc_1640 K+ transport systems NAD-binding component, TrkA-N. (216 aa)
	atpD	V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
	ADI32388.1	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (654 aa)
	ADI32389.1	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit. (155 aa)
	atpE	H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (196 aa)
	ADI32392.1	Hypothetical protein. (108 aa)
	atpA	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (592 aa)
	ADI32419.1	PFAM: zinc/iron permease; KEGG: dvl:Dvul_2882 zinc/iron permease. (267 aa)
	ADI32458.1	PFAM: TrkA-N domain protein; KEGG: seg:SG4029 potassium transporter peripheral membrane component. (214 aa)

Your Current Organism:

Staphylothermus hellenicus

NCBI taxonomy Id: 591019
Other names: S. hellenicus DSM 12710, Staphylothermus hellenicus BK20S6-10-b1, Staphylothermus hellenicus DSM 12710, Staphylothermus hellenicus P8, Staphylothermus hellenicus str. DSM 12710, Staphylothermus hellenicus strain DSM 12710, Staphylothermus sp. P8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADI32258.1	ADI32419.1	Shell_1157	Shell_1327	Hypothetical protein; KEGG: sun:SUN_1293 Mn transporter.	PFAM: zinc/iron permease; KEGG: dvl:Dvul_2882 zinc/iron permease.	0.473
ADI32388.1	ADI32389.1	Shell_1295	Shell_1296	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	0.999
ADI32388.1	ADI32392.1	Shell_1295	Shell_1299	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	Hypothetical protein.	0.999
ADI32388.1	atpA	Shell_1295	Shell_1300	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.999
ADI32388.1	atpB	Shell_1295	Shell_1301	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.	0.999
ADI32388.1	atpD	Shell_1295	Shell_1292	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32388.1	atpE	Shell_1295	Shell_1297	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32389.1	ADI32388.1	Shell_1296	Shell_1295	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.999
ADI32389.1	ADI32392.1	Shell_1296	Shell_1299	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	Hypothetical protein.	0.999
ADI32389.1	atpA	Shell_1296	Shell_1300	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.999
ADI32389.1	atpB	Shell_1296	Shell_1301	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.	0.999
ADI32389.1	atpD	Shell_1296	Shell_1292	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32389.1	atpE	Shell_1296	Shell_1297	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32392.1	ADI32388.1	Shell_1299	Shell_1295	Hypothetical protein.	PFAM: V-type ATPase 116 kDa subunit; KEGG: nam:NAMH_0030 putative V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.999
ADI32392.1	ADI32389.1	Shell_1299	Shell_1296	Hypothetical protein.	PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein MGC64475; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit.	0.999
ADI32392.1	atpA	Shell_1299	Shell_1300	Hypothetical protein.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.999
ADI32392.1	atpB	Shell_1299	Shell_1301	Hypothetical protein.	H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.	0.999
ADI32392.1	atpD	Shell_1299	Shell_1292	Hypothetical protein.	V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32392.1	atpE	Shell_1299	Shell_1297	Hypothetical protein.	H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ADI32419.1	ADI32258.1	Shell_1327	Shell_1157	PFAM: zinc/iron permease; KEGG: dvl:Dvul_2882 zinc/iron permease.	Hypothetical protein; KEGG: sun:SUN_1293 Mn transporter.	0.473

page 1 of 3

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About