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| | torR | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa) |
| | torT | TMAO reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa) |
| | ANA27671.1 | Histidine kinase; Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide; Derived by automated computational analysis using gene prediction method: Protein Homology. (912 aa) |
| | glnG | Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa) |
| | glnL | Nitrogen regulation protein NR(II); Sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa) |
| | cpxA | Two-component sensor protein; Part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa) |
| | cpxR | Response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa) |
| | cpxP | Periplasmic repressor CpxP; Repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa) |
| | zraP | Zinc resistance protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family. (151 aa) |
| | ANA27926.1 | Sensor protein ZraS; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa) |
| | hydG | DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa) |
| | ANA27988.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa) |
| | tsr_2 | Chemotaxis protein; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | ycdT | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa) |
| | arcA_1 | TorR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa) |
| | glnD | protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (890 aa) |
| | rcsF | Membrane protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family. (134 aa) |
| | ANA28633.1 | Propionate catabolism operon regulatory protein PrpR; Sigma-54 dependent activator family protein; activates the prpBCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa) |
| | adrA | Diguanylate cyclase; Catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa) |
| | glnK | Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa) |
| | ANA28717.1 | Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa) |
| | yjcC_1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa) |
| | yedV | Histidine kinase; Member of a two-component regulatory system. (452 aa) |
| | hprR | Transcriptional regulator; Induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | flgN | Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa) |
| | flgM | Negative regulator of flagellin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | flgA | Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (219 aa) |
| | flgB | Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (138 aa) |
| | flgC | With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa) |
| | flgD | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. (232 aa) |
| | flgE | The hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | flgF | Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa) |
| | flgG | Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa) |
| | flgH | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (232 aa) |
| | flgI | Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (365 aa) |
| | flgJ | Flagellar rod assembly protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa) |
| | flgK | With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | flgL | With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa) |
| | ANA29411.1 | Diguanylate cylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa) |
| | ydiV | Cyclic di-GMP regulator CdgR; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa) |
| | ttrS | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa) |
| | ttrR | Tetrathionate response regulatory protein TtrR; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa) |
| | nreC | Histidine kinase; Is phosphorylated by SsrA; is involved in the expression of the virulence genes of Salmonella pathogenicity island-2; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | ANA29503.1 | Histidine kinase; Phosphorylates the response regulator SsrB; is involved in the expression of the virulence genes of Salmonella pathogenicity island-2; Derived by automated computational analysis using gene prediction method: Protein Homology. (916 aa) |
| | ANA29752.1 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa) |
| | ANA29781.1 | Chemoreceptor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa) |
| | ANA29823.1 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | gmr_3 | RNase II stability modulator; c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa) |
| | ycgR | Flagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. (244 aa) |
| | SBOV18551 | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa) |
| | ANA29997.1 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (692 aa) |
| | flhB | Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (383 aa) |
| | cheZ | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (214 aa) |
| | cheY | Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa) |
| | cheB | Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa) |
| | cheR | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (288 aa) |
| | ANA30067.1 | Chemotaxis protein; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | cheW | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa) |
| | cheA | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa) |
| | motB | Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa) |
| | motA | Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa) |
| | flhC | Transcriptional regulator; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (192 aa) |
| | flhD | Transcriptional regulator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (113 aa) |
| | fliZ | Flagella biosynthesis protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa) |
| | fliA | Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (239 aa) |
| | ANA30103.1 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (493 aa) |
| | fliD | Flagellar protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (468 aa) |
| | fliS | Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa) |
| | fliE | Flagellar hook-basal body protein FliE; Forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa) |
| | fliF | Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (560 aa) |
| | fliG | Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (331 aa) |
| | fliH | Flagellar assembly protein H; Binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | fliI | ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa) |
| | fliJ | Flagellar biosynthesis chaperone; Flagellar protein that affects chemotactic events. Belongs to the FliJ family. (147 aa) |
| | ANA30118.1 | Flagellar hook-length control protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa) |
| | fliL | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (155 aa) |
| | fliM | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (334 aa) |
| | fliN | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (137 aa) |
| | fliO | Flagellar biosynthesis protein FliO; With FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa) |
| | fliP | Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (245 aa) |
| | fliQ | Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa) |
| | fliR | Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (264 aa) |
| | rcsA | Capsule biosynthesis protein CapA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes. (207 aa) |
| | pleD | Diguanylate cyclase; Catalyzes the formation of cyclic di-3',5'-guanylate from guanosine triphosphate; involved in the regulation of cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa) |
| | ANA30259.1 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (996 aa) |
| | mlrA | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | rtn_1 | Involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa) |
| | yojN | Phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB. (889 aa) |
| | rcsB | Transcriptional regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. Can function both in an RcsA-dependent or RcsA-independent manner. (216 aa) |
| | rcsC | Histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (948 aa) |
| | ANA30425.1 | Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa) |
| | pgtA | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa) |
| | ANA30523.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa) |
| | ANA30604.1 | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa) |
| | glnB | Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa) |
| | glrR | Response regulator GlrR; With GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa) |
| | qseE | Histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa) |
| | SBOV27461 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa) |
| | ANA30698.1 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa) |
| | ANA30724.1 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (499 aa) |
| | barA | Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology. (918 aa) |
| | trg_2 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa) |
| | trg_1 | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa) |
| | aer | Aerotaxis receptor Aer; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa) |
| | rpoN | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (477 aa) |
| | ANA31263.1 | Aerobic respiration control sensor protein ArcB; Sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology. (778 aa) |
| | ANA31299.1 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa) |
| | ANA31312.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa) |
| | igaA | Intracellular growth attenuator protein igaA; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa) |
| | envZ | Osmolarity sensor protein; Membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa) |
| | ompR | Osmolarity response regulator; Part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa) |
| | ANA31479.1 | Chemotaxis protein; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa) |
| | yhjH | c-di-GMP phosphodiesterase; In Escherichia coli this protein is involved in flagellar function; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa) |
| | hmsP | Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa) |
