STRINGSTRING
ADU67773.1 ADU67773.1 ADU67907.1 ADU67907.1 ADU67925.1 ADU67925.1 trpR trpR ADU68070.1 ADU68070.1 ADU68095.1 ADU68095.1 ADU68096.1 ADU68096.1 ADU68151.1 ADU68151.1 ADU68521.1 ADU68521.1 lolA lolA ADU68659.1 ADU68659.1 cmoM cmoM mukF mukF mukE mukE mukB mukB ADU68668.1 ADU68668.1 matP matP ADU68696.1 ADU68696.1 ADU68936.1 ADU68936.1 ADU68989.1 ADU68989.1 ADU69075.1 ADU69075.1 ADU69239.1 ADU69239.1 ADU69296.1 ADU69296.1 ADU69334.1 ADU69334.1 ADU69492.1 ADU69492.1 ADU69847.1 ADU69847.1 ADU69898.1 ADU69898.1 ADU69994.1 ADU69994.1 ADU70167.1 ADU70167.1 zapA zapA ADU70858.1 ADU70858.1 ADU70863.1 ADU70863.1 ADU71051.1 ADU71051.1 zapB zapB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU67773.1PFAM: protein of unknown function DUF1043; KEGG: eta:ETA_03010 cytochrome d ubiquinol oxidase subunit III. (134 aa)
ADU67907.1PFAM: Virulence factor, haemolysin regulator; KEGG: eta:ETA_06710 hypothetical protein. (225 aa)
ADU67925.1PFAM: Lytic transglycosylase catalytic; KEGG: eta:ETA_06900 lytic murein transglycosylase. (639 aa)
trpRTrp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region. (102 aa)
ADU68070.1KEGG: eta:ETA_08850 hypothetical protein; Belongs to the UPF0325 family. (129 aa)
ADU68095.1Transcriptional antiterminator, Rof; PFAM: Modulator of Rho-dependent transcription termination; KEGG: eta:ETA_09110 Rho-binding antiterminator protein. (87 aa)
ADU68096.1PFAM: protein of unknown function UPF0253; KEGG: stm:STM0238 hypothetical protein; Belongs to the UPF0253 family. (66 aa)
ADU68151.1PFAM: porin Gram-negative type; KEGG: esa:ESA_03112 hypothetical protein. (371 aa)
ADU68521.1PFAM: porin Gram-negative type; KEGG: eta:ETA_18600 outer membrane pore protein E. (359 aa)
lolAOuter membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (203 aa)
ADU68659.1PFAM: protein of unknown function DUF218; KEGG: ses:SARI_01972 hypothetical protein. (261 aa)
cmoMMethyltransferase type 12; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. (256 aa)
mukFChromosome segregation and condensation protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. (440 aa)
mukEChromosome segregation and condensation protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. (241 aa)
mukBChromosome segregation and condensation protein MukB domain protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. (1488 aa)
ADU68668.1PFAM: porin Gram-negative type; KEGG: sgl:SG1007 outer membrane protein F. (365 aa)
matPProtein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (155 aa)
ADU68696.1PFAM: UvrD/REP helicase; KEGG: spe:Spro_1759 DNA helicase IV. (684 aa)
ADU68936.1PFAM: porin Gram-negative type; KEGG: eta:ETA_18600 outer membrane pore protein E. (359 aa)
ADU68989.1PFAM: LPP repeat-containing protein; KEGG: kpe:KPK_2187 major outer membrane lipoprotein. (78 aa)
ADU69075.1PFAM: protein of unknown function DUF945; KEGG: eta:ETA_17640 hypothetical protein. (499 aa)
ADU69239.1PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C. (374 aa)
ADU69296.1PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1392 hypothetical protein. (85 aa)
ADU69334.1PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: eta:ETA_16730 putative protease YdgD; Belongs to the peptidase S1B family. (268 aa)
ADU69492.1KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; Belongs to the histone-like protein H-NS family. (135 aa)
ADU69847.1PFAM: protein of unknown function DUF496; KEGG: eta:ETA_13650 hypothetical protein; Belongs to the UPF0265 family. (106 aa)
ADU69898.1PFAM: AsmA family protein; KEGG: eta:ETA_13190 putative assembly protein. (599 aa)
ADU69994.1PFAM: porin Gram-negative type; KEGG: eta:ETA_12320 outer membrane protein C; Belongs to the Gram-negative porin family. (369 aa)
ADU70167.1PFAM: protein of unknown function DUF1471; KEGG: eta:ETA_10800 hypothetical protein. (90 aa)
zapAProtein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (109 aa)
ADU70858.1PFAM: MscS Mechanosensitive ion channel; KEGG: eta:ETA_29760 hypothetical protein. (1111 aa)
ADU70863.1PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_0467 hypothetical protein. (87 aa)
ADU71051.1PFAM: UspA domain protein; KEGG: dda:Dd703_3927 UspA domain protein. (144 aa)
zapBProtein of unknown function DUF904; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. (79 aa)
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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