(79 nodes) Cellular lipid catabolic process, and Fatty acid biosynthetic process network (Pseudomonas peli)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	SCW29738.1	enoyl-CoA hydratase. (229 aa)
	SCW29819.1	Short chain enoyl-CoA hydratase. (714 aa)
	SCW29832.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	SCW30606.1	acyl-CoA dehydrogenase. (815 aa)
	SCW30845.1	Enoyl-CoA hydratase/carnithine racemase. (263 aa)
	SCW31053.1	Protein of unknown function. (599 aa)
	SCW31068.1	Citronellol/citronellal dehydrogenase. (289 aa)
	SCW31086.1	geranyl-CoA carboxylase beta subunit. (538 aa)
	SCW31105.1	citronellyl-CoA dehydrogenase. (386 aa)
	SCW31124.1	isohexenylglutaconyl-CoA hydratase. (266 aa)
	SCW31140.1	geranyl-CoA carboxylase alpha subunit. (662 aa)
	SCW31155.1	Citronellol/citronellal dehydrogenase. (272 aa)
	SCW31199.1	citronellyl-CoA synthetase. (608 aa)
	SCW31347.1	Electron transfer flavoprotein alpha subunit apoprotein. (309 aa)
	SCW31363.1	Electron transfer flavoprotein beta subunit. (249 aa)
	SCW31375.1	Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (554 aa)
	SCW31568.1	3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (414 aa)
	SCW31598.1	3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
	SCW31614.1	[Acyl-carrier-protein] S-malonyltransferase. (312 aa)
	fadA	3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (391 aa)
	fadB	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
	accA	acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (316 aa)
	SCW41271.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	SCW41788.1	3-oxoacyl-[acyl-carrier protein] reductase. (252 aa)
	SCW42380.1	acyl-CoA dehydrogenase. (378 aa)
	SCW44560.1	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
	SCW44575.1	3-oxoacyl-[acyl-carrier protein] reductase. (451 aa)
	SCW44704.1	acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (153 aa)
	SCW44718.1	Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
	SCW46020.1	acyl-CoA dehydrogenase. (402 aa)
	SCW46036.1	Hypothetical protein. (427 aa)
	SCW46553.1	Nitronate monooxygenase. (347 aa)
	SCW46567.1	butyryl-CoA dehydrogenase. (600 aa)
	trmB	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (239 aa)
	SCW49583.1	fatty-acyl-CoA synthase. (549 aa)
	SCW49596.1	Acetoacetyl-[acyl-carrier protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (636 aa)
	SCW49702.1	Acyl-CoA dehydrogenase. (596 aa)
	SCW49711.1	3-hydroxyacyl-CoA dehydrogenase. (417 aa)
	SCW51819.1	Pyruvate carboxylase subunit B. (602 aa)
	SCW51826.1	Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (472 aa)
	SCW51977.1	3-oxoacyl-[acyl-carrier protein] reductase. (256 aa)
	SCW60399.1	Acyl-CoA dehydrogenase. (592 aa)
	SCW60503.1	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (303 aa)
	SCW60513.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	SCW61013.1	Oxaloacetate decarboxylase, alpha subunit. (591 aa)
	SCW61626.1	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (294 aa)
	SCW61636.1	Enoyl-CoA hydratase/carnithine racemase. (367 aa)
	SCW61648.1	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (272 aa)
	SCW61660.1	Hypothetical protein. (388 aa)
	SCW61669.1	Methylmalonate-semialdehyde dehydrogenase [acylating]. (498 aa)
	accD	acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (294 aa)
	SCW68260.1	3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (406 aa)
	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (171 aa)
	SCW68692.1	acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
	SCW71047.1	Transcriptional regulator, MerR family. (133 aa)
	SCW71059.1	isovaleryl-CoA dehydrogenase. (387 aa)
	SCW71075.1	3-methylcrotonyl-CoA carboxylase beta subunit. (535 aa)
	SCW71087.1	methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (266 aa)
	SCW71095.1	3-methylcrotonoyl-CoA carboxylase, alpha subunit. (653 aa)
	SCW71107.1	hydroxymethylglutaryl-CoA lyase. (300 aa)
	SCW71115.1	acetoacetyl-CoA synthetase. (651 aa)
	SCW71831.1	acyl-CoA dehydrogenase. (415 aa)
	SCW75609.1	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. (407 aa)
	SCW75618.1	glutaryl-CoA dehydrogenase. (392 aa)
	SCW78341.1	3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (374 aa)
	SCW78351.1	Acyl carrier protein. (88 aa)
	SCW78875.1	Electron transfer flavoprotein alpha subunit apoprotein. (407 aa)
	SCW78886.1	Electron transfer flavoprotein beta subunit. (257 aa)
	SCW79397.1	Hypothetical protein. (601 aa)
	SCW79415.1	Hypothetical protein. (598 aa)
	SCW79421.1	Hypothetical protein. (592 aa)
	SCW81592.1	Short chain enoyl-CoA hydratase. (257 aa)
	SCW83506.1	MaoC like domain-containing protein. (284 aa)
	SCW83724.1	Biotin-requiring enzyme. (1095 aa)
	SCW85249.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
	SCW85359.1	Enoyl-[acyl-carrier-protein] reductase [NADH]. (264 aa)
	SCW87006.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
	SCW88149.1	Nitronate monooxygenase. (320 aa)
	SCW88468.1	acyl-CoA dehydrogenase. (382 aa)

Your Current Organism:

Pseudomonas peli

NCBI taxonomy Id: 592361
Other names: DSM 17833, LMG 23201, LMG:23201, P. peli, Pseudomonas peli Vanparys et al. 2006, Pseudomonas sp. R-20815, strain R-20805

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCW29738.1	SCW29819.1	SAMN05216370_0226	SAMN05216370_0235	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.747
SCW29738.1	SCW29832.1	SAMN05216370_0226	SAMN05216370_0236	enoyl-CoA hydratase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.921
SCW29738.1	SCW30606.1	SAMN05216370_0226	SAMN05216370_0300	enoyl-CoA hydratase.	acyl-CoA dehydrogenase.	0.799
SCW29738.1	SCW30845.1	SAMN05216370_0226	SAMN05216370_0320	enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.718
SCW29738.1	SCW31053.1	SAMN05216370_0226	SAMN05216370_0335	enoyl-CoA hydratase.	Protein of unknown function.	0.436
SCW29738.1	SCW31086.1	SAMN05216370_0226	SAMN05216370_0337	enoyl-CoA hydratase.	geranyl-CoA carboxylase beta subunit.	0.625
SCW29738.1	SCW31105.1	SAMN05216370_0226	SAMN05216370_0338	enoyl-CoA hydratase.	citronellyl-CoA dehydrogenase.	0.741
SCW29738.1	SCW31124.1	SAMN05216370_0226	SAMN05216370_0339	enoyl-CoA hydratase.	isohexenylglutaconyl-CoA hydratase.	0.509
SCW29738.1	SCW31140.1	SAMN05216370_0226	SAMN05216370_0340	enoyl-CoA hydratase.	geranyl-CoA carboxylase alpha subunit.	0.672
SCW29738.1	SCW31199.1	SAMN05216370_0226	SAMN05216370_0344	enoyl-CoA hydratase.	citronellyl-CoA synthetase.	0.511
SCW29738.1	SCW31347.1	SAMN05216370_0226	SAMN05216370_0354	enoyl-CoA hydratase.	Electron transfer flavoprotein alpha subunit apoprotein.	0.401
SCW29738.1	SCW31363.1	SAMN05216370_0226	SAMN05216370_0355	enoyl-CoA hydratase.	Electron transfer flavoprotein beta subunit.	0.496
SCW29738.1	SCW41271.1	SAMN05216370_0226	SAMN05216370_1038	enoyl-CoA hydratase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.875
SCW29738.1	SCW42380.1	SAMN05216370_0226	SAMN05216370_1126	enoyl-CoA hydratase.	acyl-CoA dehydrogenase.	0.729
SCW29738.1	SCW44560.1	SAMN05216370_0226	SAMN05216370_1289	enoyl-CoA hydratase.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.874
SCW29738.1	SCW44718.1	SAMN05216370_0226	SAMN05216370_1300	enoyl-CoA hydratase.	Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.	0.455
SCW29738.1	SCW46020.1	SAMN05216370_0226	SAMN05216370_1390	enoyl-CoA hydratase.	acyl-CoA dehydrogenase.	0.753
SCW29738.1	SCW46036.1	SAMN05216370_0226	SAMN05216370_1391	enoyl-CoA hydratase.	Hypothetical protein.	0.588
SCW29738.1	SCW46553.1	SAMN05216370_0226	SAMN05216370_1426	enoyl-CoA hydratase.	Nitronate monooxygenase.	0.462
SCW29738.1	SCW46567.1	SAMN05216370_0226	SAMN05216370_1427	enoyl-CoA hydratase.	butyryl-CoA dehydrogenase.	0.804