(26 nodes) Butanoate metabolism network (Pseudomonas peli)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	SCW29738.1	enoyl-CoA hydratase. (229 aa)
	SCW29819.1	Short chain enoyl-CoA hydratase. (714 aa)
	SCW30845.1	Enoyl-CoA hydratase/carnithine racemase. (263 aa)
	fadB	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
	SCW35790.1	Acyl dehydratase. (156 aa)
	SCW41271.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	SCW44560.1	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
	SCW49711.1	3-hydroxyacyl-CoA dehydrogenase. (417 aa)
	SCW59656.1	Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (462 aa)
	SCW60513.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	SCW61025.1	Oxaloacetate decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (378 aa)
	SCW61636.1	Enoyl-CoA hydratase/carnithine racemase. (367 aa)
	SCW67917.1	Succinate dehydrogenase subunit C. (124 aa)
	SCW67928.1	Succinate dehydrogenase / fumarate reductase membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
	SCW67937.1	Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
	SCW67947.1	Succinate dehydrogenase subunit B. (235 aa)
	SCW71107.1	hydroxymethylglutaryl-CoA lyase. (300 aa)
	SCW75543.1	5-aminovalerate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
	SCW78573.1	Polyhydroxyalkanoate synthase. (560 aa)
	SCW78592.1	Polyhydroxyalkanoate synthase. (559 aa)
	SCW81592.1	Short chain enoyl-CoA hydratase. (257 aa)
	SCW83302.1	Acyl dehydratase. (151 aa)
	SCW85249.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
	SCW87006.1	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
	SCW87389.1	Acetolactate synthase, small subunit. (163 aa)
	SCW88020.1	5-aminovalerate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)

Your Current Organism:

Pseudomonas peli

NCBI taxonomy Id: 592361
Other names: DSM 17833, LMG 23201, LMG:23201, P. peli, Pseudomonas peli Vanparys et al. 2006, Pseudomonas sp. R-20815, strain R-20805

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCW29738.1	SCW29819.1	SAMN05216370_0226	SAMN05216370_0235	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.747
SCW29738.1	SCW30845.1	SAMN05216370_0226	SAMN05216370_0320	enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.718
SCW29738.1	SCW35790.1	SAMN05216370_0226	SAMN05216370_0670	enoyl-CoA hydratase.	Acyl dehydratase.	0.743
SCW29738.1	SCW41271.1	SAMN05216370_0226	SAMN05216370_1038	enoyl-CoA hydratase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.875
SCW29738.1	SCW44560.1	SAMN05216370_0226	SAMN05216370_1289	enoyl-CoA hydratase.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.874
SCW29738.1	SCW49711.1	SAMN05216370_0226	SAMN05216370_1634	enoyl-CoA hydratase.	3-hydroxyacyl-CoA dehydrogenase.	0.773
SCW29738.1	SCW60513.1	SAMN05216370_0226	SAMN05216370_2082	enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.729
SCW29738.1	SCW61636.1	SAMN05216370_0226	SAMN05216370_2180	enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.662
SCW29738.1	SCW71107.1	SAMN05216370_0226	SAMN05216370_3035	enoyl-CoA hydratase.	hydroxymethylglutaryl-CoA lyase.	0.560
SCW29738.1	SCW81592.1	SAMN05216370_0226	SAMN05216370_3683	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.593
SCW29738.1	SCW83302.1	SAMN05216370_0226	SAMN05216370_3877	enoyl-CoA hydratase.	Acyl dehydratase.	0.518
SCW29738.1	SCW85249.1	SAMN05216370_0226	SAMN05216370_4014	enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.840
SCW29738.1	SCW87006.1	SAMN05216370_0226	SAMN05216370_4180	enoyl-CoA hydratase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.875
SCW29738.1	fadB	SAMN05216370_0226	SAMN05216370_0422	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.781
SCW29819.1	SCW29738.1	SAMN05216370_0235	SAMN05216370_0226	Short chain enoyl-CoA hydratase.	enoyl-CoA hydratase.	0.747
SCW29819.1	SCW30845.1	SAMN05216370_0235	SAMN05216370_0320	Short chain enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.772
SCW29819.1	SCW35790.1	SAMN05216370_0235	SAMN05216370_0670	Short chain enoyl-CoA hydratase.	Acyl dehydratase.	0.863
SCW29819.1	SCW41271.1	SAMN05216370_0235	SAMN05216370_1038	Short chain enoyl-CoA hydratase.	acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.997
SCW29819.1	SCW44560.1	SAMN05216370_0235	SAMN05216370_1289	Short chain enoyl-CoA hydratase.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.998
SCW29819.1	SCW49711.1	SAMN05216370_0235	SAMN05216370_1634	Short chain enoyl-CoA hydratase.	3-hydroxyacyl-CoA dehydrogenase.	0.721