Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TGAM_0179 | TGAM_0307 | TGAM_0179 | TGAM_0307 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.905 |
| TGAM_0179 | mfnA | TGAM_0179 | TGAM_2137 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-tyrosine decarboxylase (mfnA); Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.937 |
| TGAM_0179 | sgaA | TGAM_0179 | TGAM_2012 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aminotransferase, class V, putative serine-glyoxylate aminotransferase (sgaA). | 0.465 |
| TGAM_0307 | TGAM_0179 | TGAM_0307 | TGAM_0179 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.905 |
| TGAM_0307 | TGAM_1056 | TGAM_0307 | TGAM_1056 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Multiple substrate aminotransferase; Belongs to class I. | 0.406 |
| TGAM_0307 | mfnA | TGAM_0307 | TGAM_2137 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-tyrosine decarboxylase (mfnA); Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.937 |
| TGAM_0307 | sgaA | TGAM_0307 | TGAM_2012 | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aminotransferase, class V, putative serine-glyoxylate aminotransferase (sgaA). | 0.465 |
| TGAM_1056 | TGAM_0307 | TGAM_1056 | TGAM_0307 | Multiple substrate aminotransferase; Belongs to class I. | Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.406 |
| aat | aspC-3 | TGAM_1077 | TGAM_1838 | Alanine aminotransferase (aat). | Aspartate aminotransferase (aspC). | 0.911 |
| aat | hisC-2 | TGAM_1077 | TGAM_1614 | Alanine aminotransferase (aat). | Histidinol-phosphate aminotransferase (hisC). | 0.417 |
| aspC-1 | hisC-1 | TGAM_1331 | TGAM_0545 | Aspartate aminotransferase (aspC). | Histidinol-phosphate aminotransferase (hisC). | 0.419 |
| aspC-3 | aat | TGAM_1838 | TGAM_1077 | Aspartate aminotransferase (aspC). | Alanine aminotransferase (aat). | 0.911 |
| aspC-3 | hisC-1 | TGAM_1838 | TGAM_0545 | Aspartate aminotransferase (aspC). | Histidinol-phosphate aminotransferase (hisC). | 0.879 |
| aspC-3 | hisC-2 | TGAM_1838 | TGAM_1614 | Aspartate aminotransferase (aspC). | Histidinol-phosphate aminotransferase (hisC). | 0.852 |
| aspC-3 | mfnA | TGAM_1838 | TGAM_2137 | Aspartate aminotransferase (aspC). | L-tyrosine decarboxylase (mfnA); Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.920 |
| gcvP1 | gcvP2 | TGAM_1701 | TGAM_1700 | Glycine dehydrogenase [decarboxylating] subunit 1 (glycine cleavage system P- protein) (gcvP1); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine dehydrogenase [decarboxylating] subunit 2 (glycine cleavage system P- protein) (gcvP2); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.999 |
| gcvP1 | glyA | TGAM_1701 | TGAM_1322 | Glycine dehydrogenase [decarboxylating] subunit 1 (glycine cleavage system P- protein) (gcvP1); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.973 |
| gcvP1 | kbl | TGAM_1701 | TGAM_2060 | Glycine dehydrogenase [decarboxylating] subunit 1 (glycine cleavage system P- protein) (gcvP1); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 2-amino-3-oxobutanoate synthase (glycine C-acetyltransferase) (kbl). | 0.929 |
| gcvP2 | gcvP1 | TGAM_1700 | TGAM_1701 | Glycine dehydrogenase [decarboxylating] subunit 2 (glycine cleavage system P- protein) (gcvP2); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | Glycine dehydrogenase [decarboxylating] subunit 1 (glycine cleavage system P- protein) (gcvP1); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| gcvP2 | glyA | TGAM_1700 | TGAM_1322 | Glycine dehydrogenase [decarboxylating] subunit 2 (glycine cleavage system P- protein) (gcvP2); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.984 |
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