STRINGSTRING
TGAM_0179 TGAM_0179 degT degT TGAM_0307 TGAM_0307 sgaA sgaA gcvT gcvT hisC-1 hisC-1 glmS-2 glmS-2 TGAM_1056 TGAM_1056 aat aat aspC-1 aspC-1 aspC-2 aspC-2 hisC-2 hisC-2 glmS-1 glmS-1 aspC-3 aspC-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TGAM_0179Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (445 aa)
degTPleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT); Belongs to the DegT/DnrJ/EryC1 family. (367 aa)
TGAM_0307Pyridoxal phosphate-dependent aminotransferase, class III family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
sgaAAminotransferase, class V, putative serine-glyoxylate aminotransferase (sgaA). (384 aa)
gcvTGlycine cleavage system T protein (aminomethyltransferase) (gcvT); The glycine cleavage system catalyzes the degradation of glycine. (398 aa)
hisC-1Histidinol-phosphate aminotransferase (hisC). (316 aa)
glmS-2Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (602 aa)
TGAM_1056Multiple substrate aminotransferase; Belongs to class I. (416 aa)
aatAlanine aminotransferase (aat). (398 aa)
aspC-1Aspartate aminotransferase (aspC). (389 aa)
aspC-2Aspartate aminotransferase (aspC). (359 aa)
hisC-2Histidinol-phosphate aminotransferase (hisC). (340 aa)
glmS-1Glucosamine--fructose-6-phosphate aminotransferase, sugar isomerase (SIS) domain (glmS); 1 probable transmembrane helix predicted by modhmm. (338 aa)
aspC-3Aspartate aminotransferase (aspC). (392 aa)
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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