STRINGSTRING
FSU_0145 FSU_0145 FSU_0162 FSU_0162 FSU_0182 FSU_0182 FSU_0192 FSU_0192 FSU_0196 FSU_0196 FSU_0206 FSU_0206 FSU_0226 FSU_0226 FSU_0347 FSU_0347 FSU_0451 FSU_0451 FSU_0577 FSU_0577 xynC xynC FSU_0810 FSU_0810 FSU_1114 FSU_1114 FSU_1115 FSU_1115 FSU_1165 FSU_1165 FSU_1167 FSU_1167 FSU_1195 FSU_1195 FSU_1228 FSU_1228 FSU_1340 FSU_1340 FSU_1346 FSU_1346 FSU_1373 FSU_1373 FSU_1493 FSU_1493 FSU_1685 FSU_1685 FSU_1729 FSU_1729 FSU_1774 FSU_1774 FSU_1893 FSU_1893 FSU_1894 FSU_1894 FSU_2005 FSU_2005 FSU_2013 FSU_2013 FSU_2052 FSU_2052 FSU_2054 FSU_2054 FSU_2070 FSU_2070 FSU_2130 FSU_2130 FSU_2150 FSU_2150 FSU_2181 FSU_2181 FSU_2262 FSU_2262 FSU_2263 FSU_2263 FSU_2264 FSU_2264 FSU_2265 FSU_2265 FSU_2269 FSU_2269 FSU_2270 FSU_2270 FSU_2289 FSU_2289 FSU_2292 FSU_2292 xynE xynE FSU_2294 FSU_2294 FSU_2361 FSU_2361 FSU_2362 FSU_2362 FSU_2443 FSU_2443 FSU_2468 FSU_2468 FSU_2514 FSU_2514 FSU_2516 FSU_2516 FSU_2517 FSU_2517 FSU_2518 FSU_2518 FSU_2519 FSU_2519 FSU_2520 FSU_2520 FSU_2521 FSU_2521 FSU_2522 FSU_2522 FSU_2525 FSU_2525 FSU_2528 FSU_2528 FSU_2534 FSU_2534 FSU_2535 FSU_2535 FSU_2592 FSU_2592 FSU_2741 FSU_2741 cel-3 cel-3 FSU_2851 FSU_2851 FSU_2866 FSU_2866 FSU_2898 FSU_2898 FSU_3006 FSU_3006 FSU_3024 FSU_3024 FSU_3044 FSU_3044 FSU_3045 FSU_3045 FSU_3135 FSU_3135 FSU_3190 FSU_3190 FSU_3191 FSU_3191 FSU_3192 FSU_3192
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FSU_0145Arabinosidase-like protein; Identified by similarity to GB:AAB03089.1. (604 aa)
FSU_0162Putative cellobiose/cellodextrin phosphorylase; Identified by similarity to GB:AAB95491.2; similarity to GB:AAC45511.1. (842 aa)
FSU_0182Glycosyl hydrolase family protein. (674 aa)
FSU_0192Putative xylanase; Identified by similarity to SP:P45796; match to protein family HMM PF03422; match to protein family HMM PF04616. (697 aa)
FSU_0196Putative mannanase; Identified by similarity to SP:P51529; match to protein family HMM PF00150; match to protein family HMM PF02018; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (539 aa)
FSU_0206Xylanase; Identified by similarity to GB:AAB53151.1; match to protein family HMM PF02055; Belongs to the glycosyl hydrolase 30 family. (498 aa)
FSU_0226Licheninase; Identified by similarity to SP:P17989; match to protein family HMM PF00722. (349 aa)
FSU_0347Cellulase; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (475 aa)
FSU_0451Cellulase; Identified by similarity to GB:AAA68129.1; match to protein family HMM PF00759. (555 aa)
FSU_0577Putative pectate lyase; Identified by match to protein family HMM PF00544. (589 aa)
xynCEndo-1,4-beta-xylanase; Cleaves xylans with the production of xylose, xylobiose and xylo-oligosaccharides. (608 aa)
FSU_0810Glycosyl hydrolase, family 9; Identified by similarity to SP:P04954; match to protein family HMM PF00041; match to protein family HMM PF00759. (1951 aa)
FSU_1114Carbohydrate-binding protein, CBM 6 family; Identified by match to protein family HMM PF03422; match to protein family HMM PF09492; match to protein family HMM TIGR02474. (574 aa)
FSU_1115Putative pectinesterase; Identified by match to protein family HMM PF01095; match to protein family HMM PF03422. (699 aa)
FSU_1165Beta-1,4-mannanase, man26B; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family. (773 aa)
FSU_1167Beta-1,4-mannanase, man26C; Identified by similarity to SP:P55296; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family. (596 aa)
FSU_1195Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331. (467 aa)
FSU_1228Putative cellulase; Identified by match to protein family HMM PF00150. (726 aa)
FSU_1340Conserved hypothetical protein; Identified by match to protein family HMM PF07944. (897 aa)
FSU_1346Endoglucanase, CelG; Identified by similarity to GB:AAB38548.1; match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (519 aa)
FSU_1373Carbohydrate-binding protein, CBM6 family; Identified by match to protein family HMM PF03422. (641 aa)
FSU_1493Glycosyl hydrolase, family 16; Identified by match to protein family HMM PF00722. (348 aa)
FSU_1685Putative cellulase; Identified by match to protein family HMM PF00150. (744 aa)
FSU_1729Mannanase domain protein; Identified by similarity to SP:P55278; Belongs to the glycosyl hydrolase 26 family. (382 aa)
FSU_1774Lipase/acylhydrolase, GDSL family; Identified by match to protein family HMM PF00657. (385 aa)
FSU_1893Putative endoglucanase; Identified by match to protein family HMM PF02015. (554 aa)
FSU_1894Putative endoglucanase; Identified by match to protein family HMM PF02015. (556 aa)
FSU_2005Cellulase; Identified by similarity to GB:AAD39739.1; match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (387 aa)
FSU_2013Cellulase; Identified by similarity to GB:AAC41523.1; match to protein family HMM PF00759; match to protein family HMM PF02927. (586 aa)
FSU_2052Esterase D domain protein; Identified by similarity to PIR:S36781. (504 aa)
FSU_2054Esterase D domain protein; Identified by similarity to PIR:S36781. (515 aa)
FSU_2070Cellodextrinase; Identified by similarity to GB:AAA50210.1; match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (352 aa)
FSU_2130Putative acetylxylan esterase; Identified by similarity to GB:AAB69091.1. (349 aa)
FSU_2150Glycosyl hydrolase/glycosyltransferase; Identified by match to protein family HMM PF00150; match to protein family HMM PF00535. (1072 aa)
FSU_2181Beta-1,4-mannanase, Man26A; Identified by similarity to SP:P55298; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family. (551 aa)
FSU_2262Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P45796; match to protein family HMM PF03422; match to protein family HMM PF04616. (743 aa)
FSU_2263Putative endo-1,4-beta-xylanase; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616. (740 aa)
FSU_2264Putative endo-1,4-beta-xylanase; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616. (730 aa)
FSU_2265Putative xylanase; Identified by similarity to GB:AAL16415.1; match to protein family HMM PF03422. (691 aa)
FSU_2269Xylanase/xylosidase; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616. (778 aa)
FSU_2270Putative esterase; Identified by similarity to SP:Q9Y871; match to protein family HMM PF02018; match to protein family HMM PF02230. (498 aa)
FSU_2289Carbohydrate binding protein, CMB family 6; Identified by similarity to GB:AAG02558.1; match to protein family HMM PF03422. (999 aa)
FSU_2292Xylanase XynD; Identified by similarity to GB:AAG36764.1; match to protein family HMM PF00331; match to protein family HMM PF03422. (623 aa)
xynEXylanase XynE; Identified by similarity to GB:AAG36765.1; match to protein family HMM PF00331; match to protein family HMM PF03422. (616 aa)
FSU_2294Xylanase XynB; Identified by match to protein family HMM PF00331; match to protein family HMM PF03422. (588 aa)
FSU_2361Cellulase; Identified by similarity to GB:AAC41523.1; match to protein family HMM PF00759; match to protein family HMM PF02927. (620 aa)
FSU_2362Cellulase; Identified by similarity to GB:AAC44386.1; match to protein family HMM PF00759; match to protein family HMM PF02927. (665 aa)
FSU_2443Glycosyl hydrolase family 45-like protein. (475 aa)
FSU_2468Esterase domain protein; Identified by similarity to GB:CAC85738.1. (482 aa)
FSU_2514Hypothetical protein; Identified by glimmer; putative. (785 aa)
FSU_2516Putative pectate lyase; Identified by similarity to PIR:JC7271. (583 aa)
FSU_2517Glycosyl hydrolase, family 43/carbohydrate binding module, family 6 domain protein; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616. (713 aa)
FSU_2518Esterase domain protein; Identified by similarity to SP:Q00017. (539 aa)
FSU_2519Carbohydrate-binding protein, CBM family 6; Identified by match to protein family HMM PF03422; match to protein family HMM PF07745. (599 aa)
FSU_2520Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family. (552 aa)
FSU_2521Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family. (527 aa)
FSU_2522Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616. (694 aa)
FSU_2525Conserved domain protein; Identified by similarity to GB:AAO79221.1. (882 aa)
FSU_2528Rhamnogalacturonan lyase; Identified by similarity to GB:AAK20911.1; match to protein family HMM PF01839. (744 aa)
FSU_2534Cellulase; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (631 aa)
FSU_2535Conserved hypothetical protein; Identified by similarity to PIR:F87639. (587 aa)
FSU_2592Identified by match to protein family HMM PF00933; match to protein family HMM PF01915. (678 aa)
FSU_2741Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (327 aa)
cel-3Endoglucanase 3; Exhibits both endoglucanase and cellobiosidase activities. (658 aa)
FSU_2851Glycosyl hydrolase, family 10; Identified by match to protein family HMM PF00331. (762 aa)
FSU_2866BNR repeat protein; Identified by match to protein family HMM PF02012. (854 aa)
FSU_2898Putative lipoprotein. (536 aa)
FSU_3006Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (367 aa)
FSU_3024Arabinogalactan endo-1,4-beta-galactosidase domain protein; Identified by similarity to SP:P48841; match to protein family HMM PF07745. (502 aa)
FSU_3044Carbohydrate-binding protein, CBM 6 family; Identified by similarity to GB:AAM39473.1; match to protein family HMM PF03422. (619 aa)
FSU_3045Lipase/acylhydrolase, GDSL family; Identified by match to protein family HMM PF00657. (586 aa)
FSU_3135Pectate lyase family protein/carbohydrate-binding protein, CBM6 family; Identified by match to protein family HMM PF00544; match to protein family HMM PF03422. (563 aa)
FSU_3190Glycoside hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family. (556 aa)
FSU_3191Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616. (692 aa)
FSU_3192Glycosyl hydrolase, family 43; Identified by similarity to GB:CAA71485.1; match to protein family HMM PF04616. (665 aa)
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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