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FSU_0800 FSU_0800 FSU_1009 FSU_1009 FSU_1010 FSU_1010 FSU_1011 FSU_1011 FSU_1013 FSU_1013 dtd dtd FSU_2956 FSU_2956 FSU_2957 FSU_2957
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FSU_0800Stage V sporulation protein G-like protein; Identified by similarity to SP:P28015; Belongs to the SpoVG family. (87 aa)
FSU_1009Conserved hypothetical protein; Identified by similarity to PIR:C97301; match to protein family HMM PF09579. (111 aa)
FSU_1010Putative lipoprotein. (291 aa)
FSU_1011Hypothetical protein; Identified by glimmer; putative. (276 aa)
FSU_1013Putative lipoprotein. (278 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
FSU_2956Radical SAM domain protein; Identified by match to protein family HMM PF01938; match to protein family HMM PF04055. (467 aa)
FSU_2957Stage II sporulation protein D-like protein; Identified by similarity to SP:P07372; similarity to SP:Q02113; match to protein family HMM PF08486; match to protein family HMM TIGR02669. (404 aa)
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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