(4 nodes) Rubredoxin-like domain network (Fibrobacter succinogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rub_2	Rubredoxin; Identified by similarity to SP:P00269; match to protein family HMM PF00301. (53 aa)
	FSU_1967	Rubredoxin domain/rubrerythrin domain protein; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. (185 aa)
	rbr	Rubrerythrin; Identified by similarity to SP:P24931; match to protein family HMM PF00301; match to protein family HMM PF02915. (179 aa)
	rub_1	Rubredoxin; Identified by similarity to SP:P00269; match to protein family HMM PF00301. (58 aa)

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85