STRINGSTRING
AGB01186.1 AGB01186.1 AGB01283.1 AGB01283.1 AGB01501.1 AGB01501.1 AGB01503.1 AGB01503.1 AGB01511.1 AGB01511.1 AGB01515.1 AGB01515.1 AGB02123.1 AGB02123.1 AGB02190.1 AGB02190.1 AGB02328.1 AGB02328.1 AGB02338.1 AGB02338.1 AGB02339.1 AGB02339.1 AGB02340.1 AGB02340.1 AGB02341.1 AGB02341.1 AGB02342.1 AGB02342.1 AGB02345.1 AGB02345.1 AGB02346.1 AGB02346.1 AGB02347.1 AGB02347.1 AGB02348.1 AGB02348.1 AGB02349.1 AGB02349.1 AGB02350.1 AGB02350.1 AGB02353.1 AGB02353.1 AGB02354.1 AGB02354.1 AGB02442.1 AGB02442.1 AGB02443.1 AGB02443.1 AGB02444.1 AGB02444.1 AGB02445.1 AGB02445.1 AGB02449.1 AGB02449.1 AGB02450.1 AGB02450.1 AGB02453.1 AGB02453.1 AGB02454.1 AGB02454.1 AGB02455.1 AGB02455.1 AGB02456.1 AGB02456.1 AGB02457.1 AGB02457.1 AGB02467.1 AGB02467.1 AGB02961.1 AGB02961.1 AGB03106.1 AGB03106.1 AGB03490.1 AGB03490.1 AGB03822.1 AGB03822.1 AGB03845.1 AGB03845.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB01186.1Putative UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase. (281 aa)
AGB01283.1PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. (461 aa)
AGB01501.1PFAM: NAD dependent epimerase/dehydratase family. (346 aa)
AGB01503.1Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase. (457 aa)
AGB01511.1PFAM: NAD dependent epimerase/dehydratase family. (327 aa)
AGB01515.1Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (396 aa)
AGB02123.1Nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats). (387 aa)
AGB02190.1Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (415 aa)
AGB02328.1PFAM: Calcineurin-like phosphoesterase. (253 aa)
AGB02338.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (343 aa)
AGB02339.1Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein. (329 aa)
AGB02340.1PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase. (313 aa)
AGB02341.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (313 aa)
AGB02342.1dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase. (313 aa)
AGB02345.1Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein. (341 aa)
AGB02346.1Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (374 aa)
AGB02347.1Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (three repeats). (151 aa)
AGB02348.1PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; UDP-N-acetylglucosamine 2-epimerase. (381 aa)
AGB02349.1N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase. (347 aa)
AGB02350.1TIGRFAM: N-acetyl sugar amidotransferase. (371 aa)
AGB02353.1TIGRFAM: N-acetyl sugar amidotransferase. (405 aa)
AGB02354.1CMP-N-acetylneuraminic acid synthetase; PFAM: Cytidylyltransferase. (242 aa)
AGB02442.1PFAM: ExsB; TIGRFAM: N-acetyl sugar amidotransferase. (384 aa)
AGB02443.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (403 aa)
AGB02444.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (367 aa)
AGB02445.1Hypothetical protein. (604 aa)
AGB02449.1Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein. (414 aa)
AGB02450.1PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase. (353 aa)
AGB02453.1Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (477 aa)
AGB02454.1Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
AGB02455.1Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats). (197 aa)
AGB02456.1Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold. (325 aa)
AGB02457.1Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (365 aa)
AGB02467.1Hypothetical protein. (186 aa)
AGB02961.1Glycosyltransferase; PFAM: Pentapeptide repeats (8 copies); Glycosyl transferases group 1. (787 aa)
AGB03106.1Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. (259 aa)
AGB03490.1PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase. (464 aa)
AGB03822.1Hypothetical protein. (300 aa)
AGB03845.1Hypothetical protein. (62 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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